CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0360700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.96 99.7 Os08g0360700 9636.m02689 - Conserved hypothetical protein 2e-2 At5g12390 FIS1B (FISSION 1B) S.X. H.G.
0.96 99.7 Os04g0625300 AU172759 - Hypothetical protein 2e-1 At3g15353 MT3 (METALLOTHIONEIN 3) S.X. H.G.
0.96 99.7 Os01g0127500 AK106870.1 - Conserved hypothetical protein 4e-2 At1g58420 - S.X. H.G.
0.92 99.1 Os02g0101900 AK106664.1 - - 7e-1 At1g10720 BSD domain-containing protein S.X. H.G.
0.92 99.1 Os09g0493500 AK120576.1 - Conserved hypothetical protein 3e-5 At2g21270 ubiquitin fusion degradation UFD1 family protein S.X. H.G.
0.91 98.9 Os03g0781600 AK064719.1 - Hypothetical protein 1e-1 At1g43330 myb family protein-related S.X. H.G.
0.88 96.8 Os04g0573100 AK106787.1 - Glucose-methanol-choline oxidoreductase domaincontaining protein 1e+0 At5g51950 glucose-methanol-choline (GMC) oxidoreductase family protein S.X. H.G.
0.86 96.4 Os07g0655800 AU182660 - Conserved hypothetical protein 3e+0 At3g30160 unknown protein S.X. H.G.
0.86 96.4 Os02g0110000 AK106946.1 - Lipolytic enzyme, G-D-S-L family protein 9e-1 At4g25410 DNA binding / transcription factor S.X. H.G.
0.81 94.8 Os07g0556800 AK107959.1 - Ribosome-inactivating protein family protein 8e+0 At4g35490 MRPL11 (MITOCHONDRIAL RIBOSOMAL PROTEIN L11) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
110.5 100.0 GSM159198 Inflorescence (P4, 10 - 15 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
73.0 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
57.1 99.9 GSM159199 Inflorescence (P4, 10 - 15 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
53.4 99.9 GSM159200 Inflorescence (P4, 10 - 15 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
47.2 99.9 GSM159201 Inflorescence (P5, 15 - 22 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
31.8 99.7 GSM159202 Inflorescence (P5, 15 - 22 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
22.7 99.3 GSM429984 Rice wild-type panicle rep2 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
20.0 99.1 GSM159203 Inflorescence (P5, 15 - 22 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
3.1 94.8 GSM159196 Inflorescence (P3, 5 - 10 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
1.6 90.0 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 2e-9 63 Os09g0309600 AK106857.1 - Conserved hypothetical protein 2e-3 At3g61230 LIM domain-containing protein C.G. S.X.
0.03 3e-2 40 Os01g0680600 NM_192046.1 - - 1e-1 At5g23100 unknown protein C.G. S.X.
0.03 3e-2 40 Os01g0794100 AK062404.1 - Conserved hypothetical protein 6e+0 At4g16295 SPH1 (S-PROTEIN HOMOLOGUE 1) C.G. S.X.
0.02 5e-4 46 Os12g0169800 9640.m00650 - Calcium-dependent protein kinase SK5 (EC 2.7.1.-)(CDPK) 2e-8 At4g09570 CPK4 C.G. S.X.
0.02 3e-2 40 Os01g0680500 AK069325.1 - Conserved hypothetical protein 6e-2 At3g29075 glycine-rich protein C.G. S.X.
0.02 3e-2 40 Os06g0158100 9634.m00564 - WRKY transcription factor 63 2e-7 At5g24110 WRKY30 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-2 40 Arabidopsis thaliana At5g12390 831114 FIS1B (FISSION 1B) Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division. - - - C.G. S.X.
0.04 2e-2 40 Glycine max PsAffx.C99000048_at PsAffx.C99000048 - - 4e+0 At5g66860 - C.G. S.X.
0.04 8e-3 40 Hordeum vulgare Contig15844_at Contig15844 - - 2e-10 At3g21240 4CL2 (4-COUMARATE:COA LIGASE 2) C.G. S.X.
0.04 4e-1 36 Populus trichocarpa PtpAffx.216226.1.S1_at pmrna30877 hypothetical protein - 6e-16 At2g01021 unknown protein C.G. S.X.
0.16 3e-13 75 Triticum aestivum TaAffx.9482.1.S1_at CA597312 - - 7e-2 At5g40250 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 8e-2 36 Vitis vinifera 1612339_at CF214400 similar to Os03g0839800 - 1e-1 At1g21695 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.36 1e-16 85 Zea mays Zm.12511.1.S1_at AW062063 hypothetical protein LOC100276976 - 5e+0 At5g53110 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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