Gene omics information

Query gene ID	Os08g0355400
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.94	99.4	Os08g0355400	AK060790.1	-	Plant protein of unknown function family protein	2e-1	At1g32190	-	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	Os05g0419000	AK067277.1	-	Alpha/beta hydrolase family protein	2e-1	At5g38520	hydrolase, alpha/beta fold family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.30	32.7	Os07g0601000	AK067272.1	-	NADPH HC toxin reductase (Fragment)	6e-1	At5g44610	MAP18 (Microtubule-associated Protein 18)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.29	31.1	Os01g0869800	AK058284.1	-	Photosystem II subunit PsbS	4e-8	At1g44575	NPQ4 (NONPHOTOCHEMICAL QUENCHING)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.26	25.6	Os06g0185900	AU101367	-	Glutathione peroxidase	2e-22	At2g25080	ATGPX1 (GLUTATHIONE PEROXIDASE 1)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.21	17.9	Os02g0103800	AK065309.1	-	Ferredoxin--NADP reductase, leaf isozyme,chloroplast precursor (EC 1.18.1.2) (FNR)	5e-48	At5g66190	FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.17	12.6	Os01g0896500	AK120594.1	-	Rhodanese-like domain containing protein	1e+0	At3g59780	-	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.15	10.3	Os01g0912700	AK068528.1	-	Conserved hypothetical protein	1e-1	At2g01340	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.12	7.2	Os07g0658400	AK120896.1	-	Ferredoxin-dependent glutamate synthase,chloroplast (EC 1.4.7.1) (Fd- GOGAT)	8e-81	At5g04140	GLU1 (GLUTAMATE SYNTHASE 1)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
14.7	98.6	GSM431933	Shoot- +Fe+P biological rep1	GSE17245	Transcriptome analysis of iron and phosphorus interaction in rice seedlings
13.7	98.5	GSM421724	MOCK, 96 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.8	98.4	GSM431934	Shoot- +Fe+P biological rep2	GSE17245	Transcriptome analysis of iron and phosphorus interaction in rice seedlings
11.5	98.2	GSM421704	XOO, 96 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.4	98.1	GSM421668	XOC, 2 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.8	97.8	GSM421708	MOCK, 2 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.3	97.7	GSM421672	XOC, 4 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.3	97.7	GSM421692	XOO, 4 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.2	97.7	GSM421702	XOO, 24 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.0	97.6	GSM421685	XOC, 96 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	9e-24	113	Os08g0351200	CB677679	-	Plant protein of unknown function family protein	1e+1	At4g09490	RNase H domain-containing protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.04	1e-7	59	Os08g0356700	AK066547.1	-	Plant protein of unknown function family protein	1e+0	At1g51150	DegP6 (DegP protease 6)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.04	3e-5	52	Os08g0356800	AK068581.1	-	Plant protein of unknown function family protein	4e+0	At1g56010	NAC1	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.04	5e-4	48	Os08g0356500	CB629770	-	Plant protein of unknown function family protein	6e+0	At3g51020	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	1e-1	40	Os01g0646500	AK062494.1	-	Conserved hypothetical protein	1e+0	At4g27435	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	7e-3	44	Os05g0559600	AK068237.1	-	Glycosyl transferase, family 43 protein	3e-1	At5g17760	AAA-type ATPase family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	1e-1	40	Os04g0392800	9632.m03070	-	-	6e-2	At4g16700	PSD1 (phosphatidylserine decarboxylase 1)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-1	38	Arabidopsis thaliana	At1g32190	840111	-	F:unknown;P:N-terminal protein myristoylation;C:plasma membrane;MOBPFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e+0	36	Glycine max	GmaAffx.6579.1.S1_at	CD405796	-	-	3e-1	At1g51090	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.03	7e-6	52	Hordeum vulgare	Contig10162_s_at	Contig10162	-	-	4e-1	At1g74730	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	36	Populus trichocarpa	PtpAffx.215149.1.S1_at	pmrna29185	hypothetical protein	-	3e-2	At3g52440	Dof-type zinc finger domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e-3	46	Triticum aestivum	TaAffx.66617.1.S1_at	CA683691	-	-	8e-2	At4g14020	rapid alkalinization factor (RALF) family protein	C.G.	S.X.	Please select
0.02	4e+0	32	Vitis vinifera	1617334_s_at	CF607954	-	-	1e-9	At5g65660	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.02	2e+0	34	Zea mays	Zm.5321.1.A1_at	BG841445	hypothetical protein LOC100191836	-	5e+0	At2g45250	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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