CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0322500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os08g0322500 9636.m02265 - Leucine-rich repeat, plant specific containingprotein 7e-2 At3g44980 unknown protein S.X. H.G.
0.50 68.0 Os04g0158500 9632.m00674 - - 5e-1 At2g37580 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.46 60.9 Os03g0560000 AK067185.1 - Hypothetical protein 2e+0 At4g22850 - S.X. H.G.
0.27 27.5 Os07g0489100 9635.m02993 - - 3e-9 At3g44540 FAR4 (FATTY ACID REDUCTASE 4) S.X. H.G.
0.24 22.4 Os02g0675900 9630.m04397 - - 2e+0 At3g54150 embryo-abundant protein-related S.X. H.G.
0.11 6.5 Os01g0132100 NM_184252.1 - Leucine-rich repeat, plant specific containingprotein 5e+0 At1g71780 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
116.1 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
25.9 99.5 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.4 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.1 99.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.0 99.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.1 98.8 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.1 98.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.0 98.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.4 98.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
14.9 98.6 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 2e-53 212 Os03g0400800 NM_184610.1 - Protein prenyltransferase domain containingprotein 4e-5 At1g74360 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.02 1e-1 40 Os02g0161700 9630.m00595 - Leucine-rich repeat, cysteine-containing typecontaining protein 5e-3 At2g26730 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.01 1e-1 40 Os02g0515100 AK106640.1 - Conserved hypothetical protein 1e+0 At5g23750 remorin family protein C.G. S.X.
0.01 1e-1 40 Os10g0155800 AK120029.1 - Protein kinase domain containing protein 8e-6 At1g34110 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.01 1e-1 40 Os10g0527900 AK110508.1 - Leucine-rich repeat, typical subtype containingprotein 6e-3 At5g47220 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) C.G. S.X.
0.01 6e-1 38 Os11g0123300 9639.m00210 - - 3e-1 At1g52342 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 7e-2 40 Arabidopsis thaliana At3g44980 823633 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.01 4e-1 38 Glycine max HgAffx.20945.1.S1_at BI748808 - - 2e-1 At4g23885 unknown protein C.G. S.X.
0.01 2e+0 34 Hordeum vulgare EBpi03_SQ003_E09_s_at EBpi03_SQ003_E09 - - 8e-1 At4g31460 ribosomal protein L28 family protein C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.225851.1.S1_at pmrna45476 hypothetical protein - 1e-1 Atcg00680 - C.G. S.X.
0.01 1e+0 36 Triticum aestivum TaAffx.84347.1.S1_at CA638902 - - 3e-1 At5g16760 inositol 1,3,4-trisphosphate 5/6-kinase C.G. S.X.
0.01 3e-1 36 Vitis vinifera 1620573_at CB836894 - - 1e+0 At1g15790 unknown protein C.G. S.X.
0.01 2e+0 34 Zea mays Zm.11919.1.A1_a_at CF630475 hypothetical protein LOC100279890 - 3e-7 At3g01015 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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