CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0303100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os08g0303100 9636.m02060 - - 5e-2 At5g66230 unknown protein S.X. H.G.
0.83 95.8 Os01g0288100 NM_183572.1 - - 1e-1 At1g07175 unknown protein S.X. H.G.
0.71 89.6 Os11g0187200 9639.m00790 - - 2e-1 At2g23320 WRKY15 S.X. H.G.
0.67 87.2 Os10g0343950 9638.m01678 - - 6e+0 At3g16660 unknown protein S.X. H.G.
0.67 87.2 Os06g0706000 AK070685.1 - Hypothetical protein 4e-1 At2g02040 PTR2 (PEPTIDE TRANSPORTER 2) S.X. H.G.
0.56 76.3 Os12g0511700 9640.m03180 - - 1e-1 At3g03030 F-box family protein S.X. H.G.
0.50 68.0 Os04g0232500 9632.m01461 - - 1e+0 At1g13440 GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
108.8 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
100.5 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
67.8 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
14.6 98.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.6 98.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.8 98.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.6 97.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.3 97.9 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.4 97.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.59 8e-67 256 Os10g0108200 9638.m00090 - - 3e+0 At5g66090 unknown protein C.G. S.X.
0.46 2e-73 278 Os04g0332900 9632.m02496 - - 3e+0 At5g17150 - C.G. S.X.
0.41 3e-100 367 Os12g0201600 9640.m00938 - - 1e+0 At1g13340 unknown protein C.G. S.X.
0.37 2e-58 228 Os01g0371900 NM_193844.1 - - 1e+1 At3g48570 protein transport protein SEC61 gamma subunit, putative C.G. S.X.
0.23 1e-56 222 Os12g0164000 9639.m00199 - - 2e+0 At4g05590 unknown protein C.G. S.X.
0.14 9e-70 266 Os07g0253900 9635.m01494 - - 1e-3 At3g50550 unknown protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-2 40 Arabidopsis thaliana At5g66230 836755 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPBV - - - C.G. S.X.
0.04 1e-3 46 Glycine max HgAffx.22400.1.S1_at BI396680 - - 3e+0 At5g44568 unknown protein C.G. S.X.
0.03 4e-1 36 Hordeum vulgare Contig22331_at Contig22331 - - 6e+0 At5g26805 unknown protein C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.204855.1.S1_at pmrna9593 - - 2e-15 At5g13730 SIG4 (SIGMA FACTOR 4) C.G. S.X.
0.02 2e-1 38 Triticum aestivum TaAffx.32265.1.S1_at CA597903 - - 8e-1 At1g12340 - C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1615781_at CD006909 - - 1e+0 At3g19990 unknown protein C.G. S.X.
0.03 3e-1 36 Zea mays Zm.16320.1.S1_at CO526259 hypothetical protein LOC100193231 - 3e-6 At3g19910 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage