CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0275400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os08g0275400 9636.m01744 - - 1e+0 At5g50740 metal ion binding S.X. H.G.
0.61 81.2 Os05g0287100 9633.m01925 - - 9e+0 At5g27541 S.X. H.G.
0.57 77.0 Os04g0265400 9632.m01771 - - 9e+0 At1g32920 unknown protein S.X. H.G.
0.57 77.0 Os11g0138225 9639.m00338 - - 1e+1 At5g16980 NADP-dependent oxidoreductase, putative S.X. H.G.
0.50 68.0 Os01g0522800 CB627985 - ARM repeat fold domain containing protein 2e+0 At4g10880 unknown protein S.X. H.G.
0.39 48.3 Os03g0601400 9631.m03890 - - 5e+0 At5g06470 glutaredoxin family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
28.7 99.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.9 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.9 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.2 99.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.8 99.6 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.7 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.6 99.5 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
24.4 99.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.9 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.7 99.4 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 8e-40 165 Os01g0369800 9631.m03785 - - 7e+0 At2g46540 unknown protein C.G. S.X.
0.21 7e-22 105 Os10g0468050 9638.m02879 - - 9e+0 At5g04820 OFP13 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13) C.G. S.X.
0.10 1e-23 111 Os01g0276900 AK105130.1 - Conserved hypothetical protein 9e-2 At2g44840 ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13) C.G. S.X.
0.03 3e-30 133 Os06g0361500 AK100549.1 - Conserved hypothetical protein 1e-2 At3g08580 AAC1 (ADP/ATP CARRIER 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At5g50740 835146 metal ion binding F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POMBFV - - - C.G. S.X.
0.04 1e+0 34 Glycine max HgAffx.19654.1.S1_at CD748124 - - 2e+1 At5g45350 proline-rich family protein C.G. S.X.
0.03 1e-1 36 Hordeum vulgare Contig6751_at Contig6751 - - 1e+0 At3g04990 - C.G. S.X.
0.04 6e+0 32 Populus trichocarpa PtpAffx.214046.1.S1_at pmrna27347 hypothetical protein - 6e-1 At3g49270 unknown protein C.G. S.X.
0.04 3e-1 36 Triticum aestivum Ta.23753.3.S1_x_at CA699040 - - 4e+0 At3g28560 - C.G. S.X.
0.03 8e-2 36 Vitis vinifera 1619284_at BQ799062 hypothetical protein LOC100259662 - 5e-6 At2g20790 protein binding C.G. S.X.
0.03 7e+0 30 Zea mays ZmAffx.799.1.A1_at AI770347 - - 5e-2 At1g75080 BZR1 (BRASSINAZOLE-RESISTANT 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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