Gene omics information

Query gene ID Os08g0240500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os08g0240500CB000335-Glycoside hydrolase, family 16 protein1e+0At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)S.X.H.G.
0.5068.0Os05g0202300AK109150.1-Conserved hypothetical protein1e-1At5g14180MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1)S.X.H.G.
0.5068.0Os10g04530009638.m02727-Eggshell protein family protein3e-1At1g02405proline-rich family proteinS.X.H.G.
0.3236.3Os06g0192400AK108798.1-Glycosyl transferase, family 31 protein4e-2At5g47550cysteine protease inhibitor, putative / cystatin, putativeS.X.H.G.
0.2931.1Os01g0899700AK110796.1-Pollen Ole e 1 allergen and extensin domaincontaining protein8e-1At5g45550mob1/phocein family proteinS.X.H.G.
0.1611.3Os05g0286100AK108829.1-Transcriptional regulator SUPERMAN1e-1At4g17810nucleic acid binding / transcription factor/ zinc ion bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.198.8GSM359922Pokkali root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
12.898.4GSM359906FL478 root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
12.398.3GSM359920Pokkali root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
12.398.3GSM275410Bala root tip_At the wax layer_rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
11.798.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.198.2GSM359916IR63731 root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
10.898.1GSM359923Pokkali root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
10.698.1GSM359917IR63731 root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
10.598.1GSM359918IR63731 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
10.098.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.232e-757Os04g0604200AK063614.1--1e-4At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.149e-446Os06g0696400AK104912.1-Xyloglycan endo-transglycosylase precursor7e-10At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)C.G.S.X.
0.061e-965Os04g0603900AK099651.1-Conserved hypothetical protein1e-4At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.064e-654Os08g02378009636.m01388-Xyloglucan endotransglycosylase (Fragment)5e-4At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.062e-344Os04g0604300AF443603.1-Xyloglucan endotransglucosylase/hydrolase protein24 precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristemprotein 5) (MERI-5 protein) (MERI5 protein)(Endo-xyloglucan transferase) (Xyloglucanendo-1,4-beta-D-glucanase)4e-5At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.033e-240Os04g0604900AK059203.1-Xyloglucan endotransglycosylase (Fragment)2e-10At5g57540xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeC.G.S.X.
0.011e-138Os04g0474300AK066908.1-Conserved hypothetical protein1e-1At5g54570BGLU41 (BETA GLUCOSIDASE 41)C.G.S.X.
0.015e-136Os04g0604000AK100738.1-Actin filament bundling protein P-115-ABP8e-15At4g30160VLN4 (ARABIDOPSIS THALIANA VILLIN 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e+034Arabidopsis thalianaAt4g14130827051XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)xyloglucan endotransglycosylase-related protein (XTR7)---C.G.S.X.
0.106e-342Glycine maxGma.3526.1.S1_atBE819881--8e-19At4g30270MERI5B (meristem-5)C.G.S.X.
0.234e-23107Hordeum vulgareContig22868_atContig22868--5e-1At4g18990xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeC.G.S.X.
0.071e-344Populus trichocarpaPtpAffx.5903.1.A1_a_atCN519614hypothetical protein-3e-31At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.306e-27121Triticum aestivumTaAffx.84102.1.S1_atCA644687--3e-4At4g03210XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9)C.G.S.X.
0.105e-1269Vitis vinifera1619068_atCF215954hypothetical protein LOC100250461-1e-13At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.095e-444Zea maysZm.14507.3.A1_atBG266679--5e+0At5g44565unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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