CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0238200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os08g0238200 AK067264.1 - Endo-1,3;1,4-beta-D-glucanase precursor (EC3.2.1.-) 2e+0 At3g23570 dienelactone hydrolase family protein S.X. H.G.
0.60 79.7 Os08g0509200 AK067001.1 - Amygdalin hydrolase isoform AH I precursor (EC3.2.1.117) 1e+0 At2g03020 heat shock protein-related S.X. H.G.
0.50 68.0 Os01g0872600 AK060248.1 - Hypothetical protein 6e-2 At1g72125 transporter S.X. H.G.
0.25 24.1 Os03g0832800 AK062843.1 - Phospholipid/glycerol acyltransferase familyprotein 4e-2 At4g00400 GPAT8 (glycerol-3-phosphate acyltransferase 8) S.X. H.G.
0.08 4.2 Os04g0401000 CB652365 - Heavy metal transport/detoxification proteindomain containing protein 8e-2 At5g59040 COPT3 S.X. H.G.
0.07 3.7 Os03g0751400 AK069033.1 - 50S ribosomal protein l6 3e-53 At5g20570 RBX1 (RING-BOX 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.6 98.7 GSM421718 MOCK, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.2 97.4 GSM254092 Rice overexpressed OsSKIPa, biological repeat 2 GSE10054 Expression information of splicing factor OsSKIPa knock-down and overexpressed rice
7.2 97.4 GSM421677 XOC, 8 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.9 97.3 GSM387561 Transgenic line 22, biological rep. 3 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
6.7 97.3 GSM421716 MOCK, 8 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.6 97.3 GSM421714 MOCK, 4 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.6 97.3 GSM421697 XOO, 8 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.5 97.2 GSM254096 Rice Control 1 GSE10054 Expression information of splicing factor OsSKIPa knock-down and overexpressed rice
6.3 97.2 GSM421698 XOO, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.2 97.1 GSM387557 Transgenic line 4, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.68 6e-104 379 Os11g0275000 9639.m01604 - Endo-1,3;1,4-beta-D-glucanase precursor (EC3.2.1.-) 4e-1 At5g65220 ribosomal protein L29 family protein C.G. S.X.
0.53 2e-94 347 Os08g0239300 AK059753.1 - Endo-1,3;1,4-beta-D-glucanase precursor (EC3.2.1.-) 6e-1 At4g17310 unknown protein C.G. S.X.
0.53 2e-70 268 Os08g0238600 AK066677.1 - - 2e+0 At3g23570 dienelactone hydrolase family protein C.G. S.X.
0.32 2e-76 287 Os08g0283600 9636.m01850 - - 8e-1 At2g36050 OFP15 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 15) C.G. S.X.
0.06 5e-9 63 Os05g0399100 CF293340 - Endo-1,3;1,4-beta-D-glucanase precursor (EC3.2.1.-) 1e+0 At3g01260 aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e+0 34 Arabidopsis thaliana At3g23570 821936 dienelactone hydrolase family protein F:hydrolase activity;P:response to salt stress;C:cellular_component unknown;BFPOMA - - - C.G. S.X.
0.03 8e-1 36 Glycine max GmaAffx.66363.1.S1_s_at AW203473 - - 3e+0 At3g23600 dienelactone hydrolase family protein C.G. S.X.
0.38 1e-27 123 Hordeum vulgare Contig12550_at Contig12550 - - 4e-2 At5g64620 C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2) C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.107855.2.A1_at CK092214 - - 6e-1 At5g09720 metal ion transmembrane transporter C.G. S.X.
0.33 2e-22 107 Triticum aestivum Ta.12953.1.S1_at CA728255 - - 2e+0 At2g43180 catalytic C.G. S.X.
0.03 3e+0 32 Vitis vinifera 1610161_at CK138135.1 - - 3e-16 At2g44620 MTACP-1 (MITOCHONDRIAL ACYL CARRIER PROTEIN 1) C.G. S.X.
0.10 2e-4 46 Zea mays Zm.402.1.S1_a_at AF072326.1 endo-1,3-1,4-beta-D-glucanase - 8e+0 At5g18690 AGP25 (ARABINOGALACTAN PROTEINS 25) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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