CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0225000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.48 63.7 Os08g0225000 9636.m01262 - Beta-hydroxyacyl-ACP dehydratase precursor (Fattyacid synthesis protein) 2e-17 At2g22230 beta-hydroxyacyl-ACP dehydratase, putative S.X. H.G.
0.46 60.9 Os03g0818200 AK058641.1 - Conserved hypothetical protein 5e-14 At5g58490 cinnamoyl-CoA reductase family S.X. H.G.
0.44 58.1 Os11g0460700 AK119432.1 - Protein prenyltransferase domain containingprotein 1e+0 At5g03780 TRFL10 (TRF-LIKE 10) S.X. H.G.
0.38 46.9 Os04g0672300 AK101246.1 - Conserved hypothetical protein 5e-1 At5g48290 heavy-metal-associated domain-containing protein S.X. H.G.
0.14 9.3 Os06g0660400 AK111110.1 - Conserved hypothetical protein 7e-5 At3g26790 FUS3 (FUSCA 3) S.X. H.G.
0.01 0.5 Os04g0580400 AK121581.1 - The start codon is not identified. 4e-1 At3g57870 SCE1 (SUMO CONJUGATION ENZYME 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
94.7 100.0 GSM302914 emb6D_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
76.0 99.9 GSM302915 emb6D_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
15.4 98.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.1 98.2 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
5.5 96.8 GSM275410 Bala root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
4.8 96.5 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
4.5 96.3 GSM67052 FL478 control replicate 1 GSE3053 Rice salt expression
4.0 95.9 GSM67058 IR29 control replicate 1 GSE3053 Rice salt expression
4.0 95.9 GSM67059 IR29 control replicate 2 GSE3053 Rice salt expression
3.4 95.2 GSM67054 FL478 control replicate 3 GSE3053 Rice salt expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 3e-54 212 Os05g0435700 AK069677.1 - (3R)-hydroxymyristoyl-[acyl carrier protein]dehydratase (EC 4.2.1.-) ((3R)-hydroxymyristoyl ACPdehydrase) 7e-31 At2g22230 beta-hydroxyacyl-ACP dehydratase, putative C.G. S.X.
0.22 6e-62 238 Os08g0498400 BE039667 - Caffeoyl-CoA O-methyltransferase (EC 2.1.1.104)(Trans-caffeoyl-CoA 3- O-methyltransferase) (CCoAMT)(CCoAOMT) 4e-25 At2g22230 beta-hydroxyacyl-ACP dehydratase, putative C.G. S.X.
0.03 4e-1 36 Os10g0406000 9638.m02270 - - 2e-2 At2g44840 ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13) C.G. S.X.
0.02 4e-1 36 Os01g0216500 NM_188456.1 - Lipolytic enzyme, G-D-S-L family protein 2e-6 At1g28600 lipase, putative C.G. S.X.
0.02 4e-1 36 Os05g0210100 AK122049.1 - Lipolytic enzyme, G-D-S-L family protein 2e-4 At2g33510 protein binding C.G. S.X.
0.02 4e-1 36 Os05g0452800 AK102413.1 - Zn-finger, RING domain containing protein 9e-7 At5g05830 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 2e-17 89 Arabidopsis thaliana At2g22230 816756 beta-hydroxyacyl-ACP dehydratase, putative F:3-hydroxybutyryl-[acyl-carrier-protein] dehydratase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity;P:fatty acid biosynthetic process;C:cell wall, chloroplast;BOPM - - - C.G. S.X.
0.21 6e-21 101 Glycine max Gma.9081.1.S1_at CA803057 - - 2e-22 At5g10160 beta-hydroxyacyl-ACP dehydratase, putative C.G. S.X.
0.24 8e-55 212 Hordeum vulgare Contig9102_at Contig9102 - - 3e-27 At2g22230 beta-hydroxyacyl-ACP dehydratase, putative C.G. S.X.
0.25 6e-21 101 Populus trichocarpa PtpAffx.163022.1.S1_s_at CX175629 hypothetical protein - 2e-43 At5g10160 beta-hydroxyacyl-ACP dehydratase, putative C.G. S.X.
0.29 2e-54 212 Triticum aestivum Ta.28307.1.S1_s_at BJ266961 - - 1e-20 At2g22230 beta-hydroxyacyl-ACP dehydratase, putative C.G. S.X.
0.09 7e-11 65 Vitis vinifera 1614467_at CA818630 hypothetical protein LOC100266972 - 7e-25 At2g22230 beta-hydroxyacyl-ACP dehydratase, putative C.G. S.X.
0.27 2e-61 234 Zea mays Zm.11729.1.A1_at CF635461 hypothetical protein LOC100273566 - 2e-19 At2g22230 beta-hydroxyacyl-ACP dehydratase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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