CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0187900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.78 93.4 Os08g0187900 9636.m00838 - Conserved hypothetical protein 4e-1 At4g19270 unknown protein S.X. H.G.
0.80 94.6 Os07g0425000 AK108531.1 - Conserved hypothetical protein 6e-1 At3g28740 CYP81D1 S.X. H.G.
0.79 93.6 Os07g0162100 9635.m00620 - 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminaldomain containing protein 2e+0 At5g42635 glycine-rich protein S.X. H.G.
0.78 93.4 Os01g0823600 CF305219 - Conserved hypothetical protein 1e+0 At5g06760 late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein S.X. H.G.
0.76 92.2 Os01g0175700 CB624018 - HCO3-transporter domain containing protein 2e-5 At1g15460 BOR4 (REQUIRES HIGH BORON 4) S.X. H.G.
0.75 91.9 Os03g0228200 9631.m01196 - Conserved hypothetical protein 2e-2 At2g23790 unknown protein S.X. H.G.
0.63 82.7 Os01g0700100 AK059965.1 - MtN3 and saliva related transmembrane proteinfamily protein 4e-2 At3g53420 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A) S.X. H.G.
0.60 79.7 Os02g0207400 9630.m01045 - - 2e-1 At4g34135 UGT73B2 (UDP-GLUCOSYLTRANSFERASE 73B2) S.X. H.G.
0.55 73.7 Os04g0668800 AY224471.1 - Putative thiol-disulphide oxidoreductase DCCfamily protein 1e-7 At5g50100 - S.X. H.G.
0.54 71.9 Os04g0578200 AK073300.1 - Conserved hypothetical protein 6e-1 At3g12977 DNA binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.0 99.7 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
28.4 99.6 GSM421681 XOC, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
25.4 99.5 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
24.2 99.4 GSM174887 D FR13 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
21.5 99.2 GSM421701 XOO, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
20.6 99.1 GSM421720 MOCK, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
20.3 99.1 GSM421719 MOCK, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
19.5 99.1 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
19.0 99.0 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
17.5 98.9 GSM421700 XOO, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-3 44 Os02g0724100 AK107565.1 - Conserved hypothetical protein 2e+0 At3g06780 glycine-rich protein C.G. S.X.
0.03 1e-2 42 Os05g0114300 9633.m00157 - - 1e-2 At4g19270 unknown protein C.G. S.X.
0.02 1e-2 42 Os06g0272900 9634.m01625 - Protein of unknown function DUF231 domaincontaining protein 3e+0 At5g19473 - C.G. S.X.
0.02 1e-2 42 Os09g0432900 AK106115.1 - Glycosyl transferase, family 31 protein 3e+0 At3g50830 COR413-PM2 (COLD-REGULATED 413-PLASMA MEMBRANE 2) C.G. S.X.
0.01 1e-2 42 Os04g0162600 AK105473.1 - Conserved hypothetical protein 3e+0 At5g58800 quinone reductase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-1 36 Arabidopsis thaliana At4g19270 827667 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PO - - - C.G. S.X.
0.03 6e-4 46 Glycine max Gma.9917.1.S1_at AW102286 - - 5e-4 At3g47300 SELT (SELT-LIKE PROTEIN PRECURSOR) C.G. S.X.
0.04 5e-2 38 Hordeum vulgare Contig4772_s_at Contig4772 - - 9e-1 At5g05230 ubiquitin-protein ligase C.G. S.X.
0.03 1e-2 42 Populus trichocarpa PtpAffx.209629.1.S1_at pmrna19028 hypothetical protein - 7e-3 At4g22190 unknown protein C.G. S.X.
0.03 1e-1 38 Triticum aestivum Ta.15160.1.S1_at CA692010 - - 1e+0 At5g28640 AN3 (ANGUSTIFOLIA 3) C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1615302_at CF414670 - - 7e-1 At3g44716 unknown protein C.G. S.X.
0.03 2e-1 36 Zea mays ZmAffx.180.1.A1_at AI668329 - - 8e-1 At1g17235 RTFL11 (ROTUNDIFOLIA LIKE 11) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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