CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0166500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os08g0166500 AK103907.1 - Hypothetical protein 5e-2 At3g09735 DNA-binding S1FA family protein S.X. H.G.
0.77 93.1 Os03g0784300 NM_185020.1 - Conserved hypothetical protein 4e-1 At4g09649 unknown protein S.X. H.G.
0.67 87.2 Os07g0598300 AK122151.1 - SNF2-related domain containing protein 3e-11 At5g07810 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein S.X. H.G.
0.60 79.7 Os08g0520400 AK064309.1 - Conserved hypothetical protein 2e+0 At5g23940 EMB3009 (embryo defective 3009) S.X. H.G.
0.56 76.3 Os12g0624800 AK103828.1 - Hypothetical protein 1e+0 At4g04630 unknown protein S.X. H.G.
0.50 68.0 Os04g0528400 AK101159.1 - Hus1-like protein family protein 2e-8 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
69.0 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
36.2 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.4 99.4 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.3 98.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.2 98.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.4 98.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.7 98.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.8 98.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.0 98.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-5 52 Os02g0521700 AK063046.1 - Conserved hypothetical protein 2e-3 At1g05300 ZIP5 C.G. S.X.
0.02 1e-1 40 Os02g0253700 AK072542.1 - Conserved hypothetical protein 2e+0 At3g57950 unknown protein C.G. S.X.
0.02 2e+0 34 Os05g0200100 AK061208.1 - Thioredoxin-related domain containing protein 3e-30 At4g29670 thioredoxin family protein C.G. S.X.
0.02 2e+0 34 Os07g0679500 AK102562.1 - BZIP transcription factor RF2b 8e-10 At1g06850 AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52) C.G. S.X.
0.02 2e+0 34 Os12g0582900 AK109606.1 - AP2 domain containing protein RAP2.11 (Fragment) 2e-4 At1g71130 AP2 domain-containing transcription factor, putative C.G. S.X.
0.01 7e-3 44 Os02g0665500 9630.m04316 - - 1e-7 At2g45910 protein kinase family protein / U-box domain-containing protein C.G. S.X.
0.01 7e-3 44 Os12g0510000 AK101963.1 - Hypothetical protein 3e+0 At4g04110 Toll-Interleukin-Resistance (TIR) domain-containing protein C.G. S.X.
0.01 3e-2 42 Os03g0424000 AK067340.1 - Protein kinase domain containing protein 5e-4 At3g61390 U-box domain-containing protein C.G. S.X.
0.01 4e-1 36 Os01g0870300 AB083582.1 - Ammonium transporter 2e-3 At2g38290 ATAMT2 (AMMONIUM TRANSPORTER 2) C.G. S.X.
0.01 2e+0 34 Os06g0252300 AK066448.1 - TF-like protein (Fragment) 4e-4 At1g10170 ATNFXL1 (ARABIDOPSIS THALIANA NF-X-LIKE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-2 40 Arabidopsis thaliana At3g09735 820131 DNA-binding S1FA family protein F:DNA binding;P:regulation of transcription;C:endomembrane system, nucleus;P - - - C.G. S.X.
0.02 8e-2 40 Glycine max GmaAffx.37875.1.A1_at BU544120 - - 1e-3 At1g54370 NHX5 C.G. S.X.
0.02 2e+0 34 Hordeum vulgare Contig17745_at Contig17745 - - 6e+0 At5g42630 ATS (ABERRANT TESTA SHAPE) C.G. S.X.
0.02 5e-3 44 Populus trichocarpa PtpAffx.249.334.S1_at CF227340 hypothetical protein - 3e-11 At5g39850 40S ribosomal protein S9 (RPS9C) C.G. S.X.
0.02 4e+0 34 Triticum aestivum TaAffx.38843.1.S1_at BJ208630 - - 2e-1 At5g49710 unknown protein C.G. S.X.
0.02 6e-2 38 Vitis vinifera 1617308_at CF568997 - - 1e-6 At1g58170 disease resistance-responsive protein-related / dirigent protein-related C.G. S.X.
0.01 1e+0 34 Zea mays Zm.13339.1.S1_at BU197824 - - 5e-3 At4g30400 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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