CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0158800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os08g0158800 AK107200.1 - Hypothetical protein 2e-1 At1g44191 - S.X. H.G.
0.60 79.7 Os01g0840900 AK063699.1 - Hypothetical protein 2e-1 At1g71090 auxin efflux carrier family protein S.X. H.G.
0.47 62.3 Os02g0202800 AK102082.1 - FAR1 domain containing protein 8e-2 At4g35040 bZIP transcription factor family protein S.X. H.G.
0.35 41.7 Os01g0810600 AK109802.1 - Protein kinase domain containing protein 1e-2 At1g51880 leucine-rich repeat protein kinase, putative S.X. H.G.
0.27 27.5 Os02g0235000 9630.m01296 - ARP2/3 complex, 21 kDa p21-Arc subunit familyprotein 2e+0 At1g60430 ARPC3 (actin-related protein C3) S.X. H.G.
0.14 9.3 Os04g0464600 AK105634.1 - Zn-finger, C2H2 type domain containing protein 2e-1 At5g47220 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
33.4 99.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.3 99.8 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.8 99.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.2 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.8 99.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.9 99.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.6 98.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.3 98.9 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.1 98.8 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.33 9e-116 418 Os01g0324800 NM_183801.1 - - 4e-1 At2g15580 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.06 1e-47 192 Os08g0158900 AK067062.1 - Nucleolar GTP-binding 1 domain containing protein 3e-6 At1g80770 PDE318 (pigment defective 318) C.G. S.X.
0.06 2e-33 145 Os02g0107600 AK067983.1 - Conserved hypothetical protein 3e-2 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-1 38 Arabidopsis thaliana At1g44191 5007774 - Encodes a ECA1 gametogenesis related family protein - - - C.G. S.X.
0.02 3e-1 38 Glycine max GmaAffx.15479.1.S1_at BG042505 - - 4e-18 At1g76710 SDG26 (SET DOMAIN GROUP 26) C.G. S.X.
0.08 2e-15 83 Hordeum vulgare Contig5587_at Contig5587 - - 8e-1 At2g30130 ASL5 C.G. S.X.
0.02 6e-2 40 Populus trichocarpa PtpAffx.219663.1.S1_at pmrna35630 hypothetical protein - 1e+1 At3g43505 LCR30 (Low-molecular-weight cysteine-rich 30) C.G. S.X.
0.02 1e-2 42 Triticum aestivum TaAffx.110128.1.S1_at CA663485 - - 2e-5 At3g59710 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1619549_at BQ797192 hypothetical protein LOC100250270 - 1e-3 At1g43620 UDP-glucose:sterol glucosyltransferase, putative C.G. S.X.
0.02 1e+0 34 Zea mays Zm.14541.1.S1_a_at AY107924.1 agmatine coumaroyltransferase - 2e+1 At5g18403 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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