CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0158600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 77.0 Os08g0158600 NM_189050.1 - Conserved hypothetical protein 3e+0 At1g31330 PSAF (photosystem I subunit F) S.X. H.G.
0.33 38.8 Os02g0270200 AK110825.1 - Peptidase S8 and S53, subtilisin, kexin, sedolisindomain containing protein 5e-3 At4g21640 subtilase family protein S.X. H.G.
0.27 27.5 Os02g0753500 AK072727.1 - TPR-like domain containing protein 1e+1 At5g62720 integral membrane HPP family protein S.X. H.G.
0.21 17.9 Os05g0591600 9633.m04847 - Lysine decarboxylase-like protein 1e-13 At2g37210 - S.X. H.G.
0.06 3.0 Os02g0515200 AK108843.1 - Conserved hypothetical protein 6e-1 At3g46130 MYB111 (MYB DOMAIN PROTEIN 111) S.X. H.G.
0.01 0.5 Os02g0740400 AK070261.1 - Lipolytic enzyme, G-D-S-L family protein 3e+0 At2g32890 RALFL17 (RALF-LIKE 17) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.0 99.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.0 99.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.2 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.8 99.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.2 99.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.9 99.0 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.0 98.9 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.9 98.9 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.4 98.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 1e-13 77 Os02g0534400 AB073749.1 - Cell wall invertase (EC 3.2.1.26) 5e-6 At3g52600 AtcwINV2 (Arabidopsis thaliana cell wall invertase 2) C.G. S.X.
0.04 9e-5 48 Os09g0554200 AK108361.1 - Zn-finger, RING domain containing protein 2e-3 At4g22770 DNA-binding family protein C.G. S.X.
0.04 4e-4 46 Os04g0382900 AK062807.1 - Conserved hypothetical protein 2e+0 At3g18518 RTFL20 (ROTUNDIFOLIA LIKE 20) C.G. S.X.
0.02 4e-4 46 Os04g0477200 AK072552.1 - Protein prenyltransferase domain containingprotein 1e+0 At5g25570 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 32 Arabidopsis thaliana At1g31330 840021 PSAF (photosystem I subunit F) Encodes subunit F of photosystem I. - - - C.G. S.X.
0.03 6e-2 38 Glycine max PsAffx.C1000080_at PsAffx.C1000080 - - 2e-2 At1g04445 zinc finger (C2H2 type) family protein C.G. S.X.
0.06 1e-3 42 Hordeum vulgare Contig5903_s_at Contig5903 - - 5e+0 At5g55610 unknown protein C.G. S.X.
0.04 4e+0 32 Populus trichocarpa PtpAffx.218222.1.S1_at pmrna33772 hypothetical protein - 1e-2 At2g28671 unknown protein C.G. S.X.
0.06 1e-2 40 Triticum aestivum Ta.19403.1.S1_at CA651284 - - 2e-1 At4g19270 unknown protein C.G. S.X.
0.05 3e+0 30 Vitis vinifera 1617898_at CF605263 hypothetical protein LOC100244372 - 3e-1 At5g49610 F-box family protein C.G. S.X.
0.04 2e-2 38 Zea mays Zm.16228.2.S1_x_at CF627633 hypothetical protein LOC100275186 - 2e-2 At4g17310 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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