CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0157600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.92 99.1 Os08g0157600 AY452478.1 - Myb, DNA-binding domain containing protein 5e-31 At1g01060 LHY (LATE ELONGATED HYPOCOTYL) S.X. H.G.
0.67 87.2 Os08g0178800 CA766768 - Hypothetical protein 2e+0 At1g54775 - S.X. H.G.
0.60 79.7 Os05g0582400 AK069254.1 - Blast and wounding induced mitogen-activatedprotein kinase 6e-43 At1g53510 ATMPK18 S.X. H.G.
0.59 78.0 Os01g0775100 CB630660 - Plus-3 domain containing protein 5e-1 At4g32930 unknown protein S.X. H.G.
0.58 77.0 Os01g0725800 AK063441.1 - Protein kinase family protein 3e-19 At2g47110 UBQ6 S.X. H.G.
0.57 77.0 Os02g0693500 AK103651.1 - Conserved hypothetical protein 6e-1 At4g17790 - S.X. H.G.
0.57 77.0 Os03g0230500 AK100971.1 - Inositol 1, 3, 4-trisphosphate 56-kinase familyprotein 1e-12 At4g08170 inositol 1,3,4-trisphosphate 5/6-kinase family protein S.X. H.G.
0.51 68.7 Os03g0426800 AK099511.1 - Ubiquitin domain containing protein 4e-4 At1g77870 MUB5 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 5 PRECURSOR) S.X. H.G.
0.50 68.0 Os01g0171800 AK067987.1 - Conserved hypothetical protein 2e-1 At5g62960 unknown protein S.X. H.G.
0.47 62.3 Os02g0771100 AB040053.1 - COP1 regulatory protein (Constitutivephotomorphogenesis protein 1) 3e-29 At2g32950 COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.8 97.8 GSM421706 XOO, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.6 97.5 GSM421681 XOC, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.1 97.4 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.9 97.3 GSM421722 MOCK, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.7 97.3 GSM421702 XOO, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.7 97.3 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.7 97.3 GSM421719 MOCK, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.6 97.3 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
6.6 97.3 GSM421682 XOC, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.4 97.2 GSM421683 XOC, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e+0 32 Os07g0110900 AK058987.1 - Conserved hypothetical protein 9e-2 At4g21720 unknown protein C.G. S.X.
0.03 6e+0 32 Os08g0452600 9636.m03527 - - 5e-3 At4g05091 unknown protein C.G. S.X.
0.03 6e+0 32 Os11g0173300 CB670299 - Protein kinase domain containing protein 3e+0 At3g05625 binding C.G. S.X.
0.01 7e-1 38 Os01g0186500 9629.m00858 - - 9e-2 At2g29050 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1) C.G. S.X.
0.01 7e-1 38 Os05g0137400 BQ909233 - Phytepsin precursor (EC 3.4.23.40) (Asparticproteinase) 3e-1 At3g20550 DDL (DAWDLE) C.G. S.X.
0.01 7e-1 38 Os06g0529800 AK071835.1 - Zn-finger (putative), N-recognin domain containingprotein 6e-5 At4g23860 PHD finger protein-related C.G. S.X.
0.01 7e-1 38 Os08g0144000 AK073681.1 - Zn-finger, CCHC type domain containing protein 3e-3 At3g16350 myb family transcription factor C.G. S.X.
0.01 7e-1 38 Os12g0113900 AK121827.1 - Hypothetical protein 2e-1 At5g06150 CYC1BAT C.G. S.X.
0.01 4e-1 36 Os07g0251900 AK066280.1 - Leucine-rich repeat, plant specific containingprotein 2e-3 At5g01020 protein kinase family protein C.G. S.X.
0.01 1e+0 34 Os03g0302200 AK120853.1 - Zn-finger-like, PHD finger domain containingprotein 3e-14 At3g05670 PHD finger family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 5e-31 137 Arabidopsis thaliana At1g01060 839341 LHY (LATE ELONGATED HYPOCOTYL) LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1 - - - C.G. S.X.
0.10 3e-18 95 Glycine max GmaAffx.3765.2.A1_at BF066505 MYB transcription factor MYB114 - 1e-10 At2g46830 CCA1 (CIRCADIAN CLOCK ASSOCIATED 1) C.G. S.X.
0.59 4e-147 521 Hordeum vulgare Contig3873_at Contig3873 - - 3e-20 At1g01060 LHY (LATE ELONGATED HYPOCOTYL) C.G. S.X.
0.09 2e-16 89 Populus trichocarpa PtpAffx.7997.1.S1_at BU868664 hypothetical protein - 2e-10 At2g46830 CCA1 (CIRCADIAN CLOCK ASSOCIATED 1) C.G. S.X.
0.34 2e-55 218 Triticum aestivum Ta.7524.2.A1_a_at BF200486 - - 3e-3 At2g40410 Ca(2+)-dependent nuclease, putative C.G. S.X.
0.04 8e-12 71 Vitis vinifera 1607032_s_at CB345316 hypothetical protein LOC100250535 - 2e-18 At1g01060 LHY (LATE ELONGATED HYPOCOTYL) C.G. S.X.
0.19 6e-109 395 Zea mays Zm.7073.2.A1_at AI600777 - - 1e-2 At5g37260 RVE2 (REVEILLE 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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