CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0153600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os08g0153600 9636.m00506 - Protein prenyltransferase domain containingprotein 2e-1 At5g40405 - S.X. H.G.
0.55 73.7 Os01g0561500 BI306374 - Conserved hypothetical protein 4e+0 At3g26690 ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13) S.X. H.G.
0.50 68.0 Os03g0603700 BI811773 - Protein prenyltransferase domain containingprotein 4e+0 At5g55840 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.50 68.0 Os03g0857200 CA767322 - Conserved hypothetical protein 2e+0 At5g55550 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.40 51.1 Os03g0308900 AK064183.1 - Hypothetical protein 3e+0 At4g17340 TIP2 S.X. H.G.
0.12 7.2 Os06g0573800 AK106254.1 - Hypothetical protein 3e+0 At5g07840 ankyrin repeat family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
38.5 99.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.5 99.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.2 99.6 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.0 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.9 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.8 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.7 99.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-3 46 Os09g0327200 9637.m01313 - PCMP-H2 protein (Fragment) 3e-4 At4g02750 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.02 3e-2 42 Os11g0207800 9639.m00960 - - 2e+0 At4g16840 unknown protein C.G. S.X.
0.01 5e-4 48 Os08g0162200 AK106876.1 - TPR-like domain containing protein 7e-2 At3g46790 CRR2 (CHLORORESPIRATORY REDUCTION 2) C.G. S.X.
0.01 7e-3 44 Os01g0600400 AK064442.1 - - 2e-1 At3g09040 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.01 3e-2 42 Os03g0283500 AK103244.1 - TPR-like domain containing protein 5e-3 At2g37310 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.01 3e-2 42 Os04g0349600 AK070947.1 - TPR-like domain containing protein 2e-2 At3g19160 ATIPT8 (ATP/ADP ISOPENTENYLTRANSFERASES) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-1 38 Arabidopsis thaliana At5g40405 3771385 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB - - - C.G. S.X.
0.02 2e-2 42 Glycine max Gma.4654.1.A1_at AW309677 - - 2e-1 At2g27229 unknown protein C.G. S.X.
0.02 1e-1 38 Hordeum vulgare Contig5465_at Contig5465 - - 2e-4 At5g60460 sec61beta family protein C.G. S.X.
0.03 2e-5 52 Populus trichocarpa PtpAffx.224302.1.S1_at pmrna42726 hypothetical protein - 1e-5 At4g16835 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.02 4e-3 44 Triticum aestivum TaAffx.119811.1.S1_at BJ256491 - - 1e+0 At1g23350 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.02 2e-2 40 Vitis vinifera 1614312_at BQ798552 hypothetical protein LOC100256789 - 7e-2 At4g21065 - C.G. S.X.
0.28 6e-40 165 Zea mays Zm.2923.1.A1_at AW091518 - - 2e-6 At3g62890 binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0022900 A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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