CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0151900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.75 91.9 Os08g0151900 9636.m00489 - - 2e+0 At1g16820 vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related S.X. H.G.
0.73 91.1 Os01g0171600 9629.m00699 - - 6e+0 At2g42000 plant EC metallothionein-like family 15 protein S.X. H.G.
0.50 68.0 Os10g0172300 9638.m00790 - - 2e+0 At4g30590 plastocyanin-like domain-containing protein S.X. H.G.
0.33 38.8 Os08g0514000 9636.m04074 - Legume lectin, beta domain containing protein 3e-1 At4g02420 lectin protein kinase, putative S.X. H.G.
0.33 38.8 Os11g0152100 9639.m00460 - - 8e-1 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) S.X. H.G.
0.31 34.5 Os01g0604100 AK099765.1 - - 9e-2 At5g49840 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding S.X. H.G.
0.18 13.7 Os09g0569300 AK069587.1 - Calmodulin-binding heat-shock protein 2e-8 At4g00500 lipase class 3 family protein / calmodulin-binding heat-shock protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
143.6 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
36.2 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.0 98.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.9 98.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.8 98.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.6 98.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.4 98.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.6 98.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.6 97.9 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.0 97.8 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 3e-16 87 Os12g0204100 9640.m00965 - Major intrinsic protein family protein 2e+0 At4g10380 NIP5 C.G. S.X.
0.18 2e-10 67 Os10g0513200 9638.m03293 - NOD26-like membrane integral protein ZmNIP3-1 2e-5 At4g10380 NIP5 C.G. S.X.
0.09 8e-4 46 Os08g0152000 9636.m00490 - - 6e-4 At2g29870 major intrinsic family protein / MIP family protein C.G. S.X.
0.07 8e-4 46 Os01g0232100 AK069592.1 - Tonoplast membrane integral protein ZmTIP4-3 4e-5 At4g17340 TIP2 C.G. S.X.
0.03 8e-4 46 Os06g0552700 9634.m03403 - - 2e-3 At2g25810 TIP4 C.G. S.X.
0.02 3e-3 44 Os01g0112400 AK106825.1 - Major intrinsic protein family protein 8e+0 At3g18779 unknown protein C.G. S.X.
0.02 3e-3 44 Os08g0412800 AK108716.1 - Protein of unknown function DUF1262 family protein 3e+0 At5g10430 AGP4 (ARABINOGALACTAN PROTEIN 4) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At1g16820 838253 vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related F:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;P:ATP synthesis coupled proton transport;C:plasma membrane, vacuole;PO - - - C.G. S.X.
0.03 6e-1 36 Glycine max PsAffx.C87000010_at PsAffx.C87000010 - - 1e+0 At1g10480 ZFP5 (ZINC FINGER PROTEIN 5) C.G. S.X.
0.12 1e-8 59 Hordeum vulgare Contig16901_at Contig16901 - - 5e+0 At1g71850 ubiquitin thiolesterase C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.220685.1.S1_at pmrna37095 aquaporin, MIP family, NIP subfamily - 2e-2 At2g25810 TIP4 C.G. S.X.
0.13 3e-8 59 Triticum aestivum Ta.9143.1.S1_at CD374115 - - 2e-4 At4g10380 NIP5 C.G. S.X.
0.04 2e+0 32 Vitis vinifera 1620744_at CF403966 hypothetical protein LOC100248911 - 2e-6 At1g20340 DRT112 C.G. S.X.
0.04 5e-5 48 Zea mays Zm.1753.2.S1_a_at AW438229 NOD26-like membrane integral protein ZmNIP2-1 - 4e-1 At3g06750 hydroxyproline-rich glycoprotein family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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