CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0130000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os08g0130000 9636.m00276 - Conserved hypothetical protein 1e-11 At2g04305 magnesium transporter CorA-like protein-related S.X. H.G.
0.83 95.8 Os05g0143800 AK106538.1 - GH3 auxin-responsive promoter family protein 1e+0 At2g46505 SDH4 S.X. H.G.
0.77 93.1 Os04g0534200 AK109583.1 - Receptor kinase-like protein 8e-4 At5g41180 leucine-rich repeat protein kinase, putative S.X. H.G.
0.67 87.2 Os05g0148900 AK120912.1 - Glutathione-S-transferase 19E50 1e+0 At1g03860 ATPHB2 (PROHIBITIN 2) S.X. H.G.
0.67 87.2 Os02g0448000 9630.m02338 - Protein of unknown function DUF296 domaincontaining protein 8e-6 At4g22810 DNA-binding protein-related S.X. H.G.
0.32 36.3 Os12g0640700 AK108649.1 - N/apple PAN domain containing protein 8e-1 At5g44500 small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
32.6 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.5 98.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.7 98.4 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.2 98.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.7 98.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.0 98.0 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.5 97.9 GSM262006 IAC165, 11 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
9.3 97.9 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.3 97.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-2 42 Os03g0807500 AK068398.1 - Plastocyanin-like domain containing protein 5e-1 At1g16500 unknown protein C.G. S.X.
0.02 1e-3 46 Os06g0211200 AK105312.1 - Abscisic acid responsive elements-binding factor(ABA-responsive element binding protein 1) (AREB1) 1e-5 At3g19290 ABF4 (ABRE BINDING FACTOR 4) C.G. S.X.
0.02 2e-2 42 Os01g0386700 AK067913.1 - Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1) 2e-1 At2g11005 glycine-rich protein C.G. S.X.
0.02 2e-2 42 Os05g0550300 AK062463.1 - Nonspecific lipid transfer protein 1e+0 At1g44790 ChaC-like family protein C.G. S.X.
0.01 2e-2 42 Os04g0132400 AK110400.1 - - 6e-3 At3g24240 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.01 2e-2 42 Os07g0607400 AK106797.1 - Pectinesterase family protein 3e+0 At5g55590 QRT1 (QUARTET 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-11 71 Arabidopsis thaliana At2g04305 814969 magnesium transporter CorA-like protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPFA - - - C.G. S.X.
0.02 2e-1 38 Glycine max Gma.4846.1.S1_at BI969505 - - 2e-35 At1g53320 AtTLP7 (TUBBY LIKE PROTEIN 7) C.G. S.X.
0.02 3e-1 36 Hordeum vulgare Contig4895_at Contig4895 - - 2e-3 At2g31410 unknown protein C.G. S.X.
0.09 3e-7 57 Populus trichocarpa Ptp.2747.1.S1_at DN490576 hypothetical protein - 7e-10 At2g04305 magnesium transporter CorA-like protein-related C.G. S.X.
0.02 2e-1 38 Triticum aestivum Ta.4466.1.S1_at BJ266824 - - 1e+1 At5g55570 unknown protein C.G. S.X.
0.02 8e-1 34 Vitis vinifera 1615863_at CB971724 hypothetical protein LOC100241130 - 2e-1 At5g18690 AGP25 (ARABINOGALACTAN PROTEINS 25) C.G. S.X.
0.02 8e-2 38 Zea mays Zm.15154.1.A1_at BM080233 - - 2e-6 At2g42380 bZIP transcription factor family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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