CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0126100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 91.1 Os08g0126100 9636.m00235 - - 5e+0 At2g35090 unknown protein S.X. H.G.
0.80 94.6 Os04g0298700 9632.m02154 - Conserved hypothetical protein 2e+0 At5g64400 - S.X. H.G.
0.80 94.6 Os11g0285100 9639.m01677 - - 8e+0 At5g16140 peptidyl-tRNA hydrolase family protein S.X. H.G.
0.73 91.1 Os12g0258300 9640.m01518 - - 7e+0 At4g29240 leucine-rich repeat family protein / extensin family protein S.X. H.G.
0.73 91.1 Os02g0773000 9630.m05270 - - 4e+0 At3g29140 unknown protein S.X. H.G.
0.61 81.2 Os11g0188700 9639.m00801 - - 2e-1 At4g11870 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
87.5 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
39.6 99.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
36.5 99.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.9 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.4 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.3 99.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.9 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.9 99.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.7 99.2 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 3e-67 258 Os10g0464800 9638.m02851 - - 2e-1 At1g07135 glycine-rich protein C.G. S.X.
0.11 2e-13 79 Os10g0464500 NM_196909.1 - Zn-finger, RING domain containing protein 7e-2 At5g54900 ATRBP45A (RNA-binding protein 45A) C.G. S.X.
0.06 6e-44 180 Os12g0203700 9640.m00963 - - 1e+0 At3g49770 unknown protein C.G. S.X.
0.05 6e-7 57 Os07g0159300 9635.m00593 - - 2e+0 At5g63480 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e+0 34 Arabidopsis thaliana At5g67110 836846 ALC (ALCATRAZ) encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce. - - - C.G. S.X.
0.02 1e-1 40 Glycine max Gma.2474.2.S1_a_at BM308031 - - 2e-4 At4g39860 unknown protein C.G. S.X.
0.03 1e-1 38 Hordeum vulgare HO04L23S_at HO04L23S - - 1e+0 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.223032.1.S1_at pmrna40819 - - 3e+0 At1g12810 proline-rich family protein C.G. S.X.
0.03 7e-5 50 Triticum aestivum Ta.12529.1.S1_at CK211211 - - 4e+0 At4g14880 OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1) C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1616366_at CF215144 hypothetical protein LOC100251921 - 3e-21 At3g53500 zinc knuckle (CCHC-type) family protein C.G. S.X.
0.01 1e-1 38 Zea mays Zm.9199.1.A1_at CO522770 hypothetical protein LOC100191600 - 1e+1 At5g50562 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0016567 The process by which one or more ubiquitin moieties are added to a protein.
L GO:0022900 A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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