CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0112900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.2 Os08g0112900 AK105876.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At1g71691 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.58 77.0 Os03g0320800 AK103265.1 - Protein kinase domain containing protein 3e-2 At4g34670 40S ribosomal protein S3A (RPS3aB) S.X. H.G.
0.53 71.3 Os02g0256100 AK059595.1 - Glycoside hydrolase, family 28 protein 1e-24 At4g23820 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein S.X. H.G.
0.48 63.7 Os01g0914400 AK063138.1 - Conserved hypothetical protein 6e-3 At4g12970 unknown protein S.X. H.G.
0.47 62.3 Os02g0756100 AK060615.1 - Conserved hypothetical protein 2e+0 At3g12140 emsy N terminus domain-containing protein / ENT domain-containing protein S.X. H.G.
0.41 52.4 Os03g0239000 AK061284.1 - Glycoside hydrolase, family 16 domain containingprotein 2e-4 At1g32170 XTR4 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 4) S.X. H.G.
0.40 51.1 Os04g0525700 AK105830.1 - Peptidase S10, serine carboxypeptidase familyprotein 2e-1 At5g23210 SCPL34 S.X. H.G.
0.38 46.9 Os06g0217900 AK103765.1 - Cyclin, C-terminal domain containing protein 8e-1 At4g14520 DNA-directed RNA polymerase II-related S.X. H.G.
0.33 38.8 Os06g0478600 AK064086.1 - Leucine-rich repeat, plant specific containingprotein 9e-1 At5g01380 transcription factor S.X. H.G.
0.32 36.3 Os11g0308800 AK068828.1 - Protein kinase-like domain containing protein 5e-1 At3g56800 CAM3 (CALMODULIN 3) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
32.4 99.8 GSM99881 TCHW P23_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
19.2 99.0 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
15.9 98.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
15.1 98.6 GSM99882 TCHW P24_ir29 salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
15.1 98.6 GSM99878 TCHW P20_ir29 control, biological rep2 GSE4438 Expression data from rice under salinity stress
14.0 98.5 GSM99877 TCHW P19_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
13.0 98.4 GSM99880 TCHW P22_ir29 salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
11.4 98.2 GSM99867 TCHW P10_ir29 salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
11.4 98.2 GSM99875 TCHW P18_agami salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
10.9 98.1 GSM99879 TCHW P21_ir29 control, biological rep3 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 3e-48 194 Os05g0419800 AK100958.1 - Lipolytic enzyme, G-D-S-L family protein 2e-4 At5g08460 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.22 2e-12 75 Os01g0748500 9629.m05311 - Lipolytic enzyme, G-D-S-L family protein 9e-3 At1g33811 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.13 5e-19 97 Os12g0274200 AK063071.1 - Lipolytic enzyme, G-D-S-L family protein 8e-6 At1g71691 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.12 7e-12 73 Os05g0518300 AK061147.1 - Lipolytic enzyme, G-D-S-L family protein 8e-4 At1g71691 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.12 7e-9 61 Os01g0728100 AK070946.1 - Lipolytic enzyme, G-D-S-L family protein 1e-3 At1g29660 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.06 2e-6 54 Os10g0463200 AK108201.1 - Lipolytic enzyme, G-D-S-L family protein 1e-5 At4g28780 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.05 4e-7 56 Os02g0617400 AK108108.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At3g04290 LTL1 (LI-TOLERANT LIPASE 1) C.G. S.X.
0.05 2e-6 54 Os03g0859100 AK060992.1 - Lipolytic enzyme, G-D-S-L family protein 2e-1 At5g40630 ubiquitin family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 1e-2 42 Arabidopsis thaliana At1g71691 843496 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:unknown;PBFOM - - - C.G. S.X.
0.04 2e-2 42 Glycine max Gma.10073.2.S1_at BE473392 - - 5e-3 At4g28780 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.16 5e-22 105 Hordeum vulgare Contig12936_at Contig12936 - - 8e-3 At1g71691 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.03 7e-2 40 Populus trichocarpa Ptp.6916.1.S1_at BU828504 hypothetical protein - 1e-3 At2g19060 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.24 7e-35 149 Triticum aestivum Ta.4207.1.S1_a_at BJ261209 - - 5e-2 At1g29670 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1607951_at CA817288 hypothetical protein LOC100264984 - 4e-13 At5g42070 unknown protein C.G. S.X.
0.25 3e-44 178 Zea mays Zm.6768.1.S1_at AI396277 anther-specific proline-rich protein APG - 2e-4 At1g29670 GDSL-motif lipase/hydrolase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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