CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os08g0106100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.38 46.9 Os08g0106100 AK071868.1 - Hypothetical protein 4e-1 At3g45870 integral membrane family protein / nodulin MtN21-related S.X. H.G.
0.44 58.1 Os12g0628400 AK061110.1 - Fatty acid hydroxylase domain containing protein 1e-8 At4g20870 FAH2 (FATTY ACID HYDROXYLASE 2) S.X. H.G.
0.40 51.1 Os11g0661900 AK064062.1 - Hypothetical protein 8e-1 At5g57640 - S.X. H.G.
0.33 38.8 Os04g0419600 CR282432 - Histone H3 5e-21 At1g09200 histone H3 S.X. H.G.
0.31 34.5 Os05g0462700 AK105816.1 - Histone H4 variant TH011 6e-24 At5g59690 histone H4 S.X. H.G.
0.04 2.0 Os01g0511800 AK102912.1 - Conserved hypothetical protein 3e-2 At3g51290 proline-rich family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.3 98.4 GSM409429 Nipponbare_young panicle 2cm, biological rep5 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
12.9 98.4 GSM99879 TCHW P21_ir29 control, biological rep3 GSE4438 Expression data from rice under salinity stress
12.2 98.3 GSM409427 Nipponbare_young panicle 2cm, biological rep3 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
12.2 98.3 GSM99878 TCHW P20_ir29 control, biological rep2 GSE4438 Expression data from rice under salinity stress
12.0 98.3 GSM195221 Ovary 1, biological rep 1 GSE7951 Genome-wide gene expression profiling of rice stigma
11.9 98.3 GSM409422 Nipponbare_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
11.8 98.3 GSM99881 TCHW P23_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
11.7 98.2 GSM99877 TCHW P19_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
11.5 98.2 GSM409428 Nipponbare_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
11.1 98.2 GSM99871 TCHW P14_agami control, biological rep2 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 6e-2 40 Os12g0254900 9640.m01483 - - 3e+0 At5g25940 early nodulin-related C.G. S.X.
0.01 2e-1 38 Os11g0652100 AK103061.1 - Hypothetical protein 6e-1 At2g43550 trypsin inhibitor, putative C.G. S.X.
0.00 9e-1 36 Os10g0208500 AK065698.1 - Conserved hypothetical protein 6e-2 At1g74630 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-1 36 Arabidopsis thaliana At3g45870 823730 integral membrane family protein / nodulin MtN21-related F:unknown;P:unknown;C:membrane;BPOAMF - - - C.G. S.X.
0.02 6e-1 36 Glycine max PsAffx.CL2100Contig1_at PsAffx.CL2100Contig1 - - 5e+0 At5g57181 unknown protein C.G. S.X.
0.03 6e-2 38 Hordeum vulgare EBro08_SQ004_K17_at EBro08_SQ004_K17 - - 6e+0 At5g59840 Ras-related GTP-binding family protein C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.28903.1.S1_at DN496627 hypothetical protein - 2e-1 At5g20110 dynein light chain, putative C.G. S.X.
0.03 5e-1 36 Triticum aestivum TaAffx.24009.1.S1_at CA726741 - - 1e+0 At5g02550 unknown protein C.G. S.X.
0.03 9e-3 40 Vitis vinifera 1617057_at CB978485 hypothetical protein LOC100241489 - 1e+0 At3g09880 ATB' BETA C.G. S.X.
0.02 2e-1 36 Zea mays Zm.15818.1.S1_at M73828.1 ferredoxin5 - 8e-2 At1g10960 ATFD1 (FERREDOXIN 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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