Gene omics information

Query gene ID	Os08g0101700
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.70	88.4	Os08g0101700	AK061172.1	-	Cytochrome b561	1e-1	At1g13930	-	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.84	96.0	Os04g0657300	CB624212	-	Farnesyl pyrophosphate synthetase 2 (FPPsynthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2)[Includes: Dimethylallyltranstransferase (EC 2.5.1.1)	2e-1	At1g68552	CPuORF53 (Conserved peptide upstream open reading frame 53)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.76	92.2	Os04g0657500	AK066638.1	-	Lipase, class 3 family protein	1e+0	At3g17100	transcription factor	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.64	83.4	Os08g0432500	AK106170.1	-	ATP-dependent Clp protease adaptor protein ClpSfamily protein	3e-2	At3g61678	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.62	81.5	Os03g0744700	AK071178.1	-	Conserved hypothetical protein	4e-2	At1g62250	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.61	81.2	Os07g0656700	AU173917	-	Protein of unknown function DUF1334 family protein	4e-11	At5g13720	-	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.60	79.7	Os11g0621400	AK062468.1	-	Hypothetical protein	1e+0	At4g34290	SWIB complex BAF60b domain-containing protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.56	76.3	Os12g0271700	AK110824.1	-	Solanesyl diphosphate synthase	1e-18	At1g17050	SPS2 (Solanesyl diphosphate synthase 2)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.56	76.3	Os05g0582300	AK101790.1	-	Solanesyl diphosphate synthase	2e-17	At1g17050	SPS2 (Solanesyl diphosphate synthase 2)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	Os10g0419500	AK071316.1	-	Acireductone dioxygenase, ARD family protein	2e-10	At5g43850	ARD4	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.7	98.5	GSM421721	MOCK, 24 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.6	98.5	GSM421701	XOO, 24 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.2	98.2	GSM421681	XOC, 24 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.7	98.1	GSM421720	MOCK, 24 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.6	98.1	GSM421679	XOC, 24 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.5	98.1	GSM421705	XOO, 96 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.2	98.0	GSM421719	MOCK, 24 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.1	98.0	GSM421723	MOCK, 96 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.0	98.0	GSM421702	XOO, 24 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.8	98.0	GSM421683	XOC, 96 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	1e-3	46	Os02g0642300	AK062638.1	-	Hypothetical protein	4e+0	At5g52030	TraB protein-related	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.05	5e-3	44	Os09g0414500	AK058840.1	-	ZF-HD homeobox protein	5e-3	At3g28917	MIF2 (MINI ZINC FINGER 2)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	1e-3	46	Os05g0429500	AK058688.1	-	Dienelactone hydrolase domain containing protein	2e+0	At1g35420	dienelactone hydrolase family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	5e-3	44	Os01g0958200	AK107370.1	-	Curculin-like (mannose-binding) lectin domaincontaining protein	3e+0	At1g79500	2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-1	38	Arabidopsis thaliana	At1g13930	837953	-	Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-2	40	Glycine max	GmaAffx.74105.1.S1_at	BQ298784	-	-	8e-1	At2g43280	far-red impaired responsive family protein / FAR1 family protein	C.G.	S.X.	Please select
0.22	4e-34	145	Hordeum vulgare	Contig17991_at	Contig17991	-	-	3e+0	Atmg00490	-	C.G.	S.X.	Please select
0.02	8e-1	36	Populus trichocarpa	PtpAffx.212916.1.S1_at	pmrna25270	hypothetical protein	-	1e-22	At5g23680	sterile alpha motif (SAM) domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.51	4e-82	305	Triticum aestivum	Ta.1620.1.S1_at	BQ162019	-	-	5e-1	At5g59820	RHL41 (RESPONSIVE TO HIGH LIGHT 41)	C.G.	S.X.	Please select
0.02	4e-2	38	Vitis vinifera	1618069_at	CD720173	-	-	6e+0	At3g55254	-	C.G.	S.X.	Please select
0.16	1e-9	63	Zea mays	Zm.4730.1.A1_at	BM078833	hypothetical protein LOC100194390	-	6e-4	At4g25570	ACYB-2	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name
L	GO:0022900	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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