CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0688400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.36 44.0 Os07g0688400 9638.m02651 - - 2e+0 At4g19270 unknown protein S.X. H.G.
0.80 94.6 Os11g0308700 9639.m01908 - - 6e-1 At4g33350 chloroplast inner membrane import protein Tic22, putative S.X. H.G.
0.67 87.2 Os05g0255200 9633.m01478 - - 7e+0 At4g09260 unknown protein S.X. H.G.
0.61 81.2 Os01g0260300 9629.m01542 - - 1e-1 At5g05230 ubiquitin-protein ligase S.X. H.G.
0.47 62.3 Os03g0791100 9631.m05665 - - 3e+0 At5g48860 unknown protein S.X. H.G.
0.44 58.1 Os04g0348200 9632.m02648 - - 2e+0 At5g35300 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
59.5 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.5 99.6 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.9 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.4 99.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.9 99.4 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.3 99.4 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.3 99.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
21.8 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.7 99.2 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.58 0 950 Os06g0277500 NM_196635.1 - - 6e-3 At3g59060 PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6) C.G. S.X.
0.35 9e-52 204 Os06g0563100 9634.m03495 - - 2e-1 At4g30460 glycine-rich protein C.G. S.X.
0.10 4e-29 129 Os05g0114700 AK111634.1 - Myb, DNA-binding domain containing protein 7e-5 At4g38620 MYB4 C.G. S.X.
0.04 2e-3 44 Os08g0230400 9636.m01319 - - 1e+0 At5g18540 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At4g19270 827667 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PO - - - C.G. S.X.
0.02 2e-1 38 Glycine max GmaAffx.37386.1.S1_at BQ742667 - - 7e-2 At5g44570 unknown protein C.G. S.X.
0.03 4e-3 42 Hordeum vulgare rbaal1i09_at rbaal1i09 - - 8e-1 At4g27900 - C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.72371.1.S1_at DN486279 hypothetical protein - 4e-1 At1g32337 unknown protein C.G. S.X.
0.03 8e-3 42 Triticum aestivum Ta.18193.1.S1_at CA631013 - - 2e-1 At3g04370 PDLP4 (PLASMODESMATA-LOCATED PROTEIN 4) C.G. S.X.
0.02 6e-1 34 Vitis vinifera 1621876_at BQ798834 hypothetical protein LOC100253321 - 7e-2 At5g50540 unknown protein C.G. S.X.
0.03 9e-4 44 Zea mays Zm.17258.1.S1_at CK369580 - - 2e-2 At2g36100 integral membrane family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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