CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0677400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.84 96.0 Os07g0677400 AF014469.1 - Peroxidase 7e-4 At3g50990 electron carrier/ heme binding / peroxidase S.X. H.G.
0.49 64.4 Os01g0853000 AK099561.1 - Conserved hypothetical protein 3e-2 At3g09050 unknown protein S.X. H.G.
0.48 63.7 Os03g0586500 AK068097.1 - Conserved hypothetical protein 2e-1 At5g22550 unknown protein S.X. H.G.
0.46 60.9 Os09g0548400 AK067622.1 - Conserved hypothetical protein 9e-1 At3g06540 GDP dissociation inhibitor family protein / Rab GTPase activator family protein S.X. H.G.
0.46 60.9 Os04g0595100 AK067781.1 - Protein of unknown function DUF760 family protein 2e-1 At4g02000 unknown protein S.X. H.G.
0.46 60.9 Os05g0128100 AK108556.1 - Hypothetical protein 6e-1 At1g71910 unknown protein S.X. H.G.
0.45 58.8 Os05g0589200 AK068666.1 - RNA polymerase, sigma subunit family protein 3e-1 At1g19930 kelch repeat-containing F-box family protein S.X. H.G.
0.44 58.1 Os07g0628900 AK111564.1 - KI domain interacting kinase 1 8e-8 At4g21390 B120 S.X. H.G.
0.43 55.4 Os03g0766800 AK120228.1 - Conserved hypothetical protein 1e+0 At3g51540 unknown protein S.X. H.G.
0.43 55.4 Os06g0316000 AK058338.1 - Hypothetical protein 4e+0 At4g14690 ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
36.3 99.8 GSM159180 Mature leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
28.1 99.6 GSM278853 KT95-418-non-infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
25.9 99.5 GSM159184 Y Leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
24.0 99.4 GSM159182 Mature leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
22.7 99.3 GSM159181 Mature leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
19.2 99.0 GSM431940 Shoot- -Fe-P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
18.9 99.0 GSM278854 KT95-418-non-infected, biological rep2 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
18.4 99.0 GSM278849 WuYun3-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
17.4 98.9 GSM431939 Shoot- -Fe-P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
13.3 98.4 GSM278847 WuYun3-non-infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.39 6e-46 186 Os07g0677100 AF014468.1 - Peroxidase 2e-4 At5g05340 peroxidase, putative C.G. S.X.
0.37 8e-73 276 Os07g0677200 AF014467.1 - Peroxidase 3e-6 At5g05340 peroxidase, putative C.G. S.X.
0.36 2e-55 218 Os07g0677300 D16442.1 - Peroxidase 2e-4 At3g50990 electron carrier/ heme binding / peroxidase C.G. S.X.
0.35 3e-51 204 Os07g0677500 AF247700.2 - Peroxidase POC1 2e-4 At5g05340 peroxidase, putative C.G. S.X.
0.30 2e-46 188 Os07g0676900 AK072862.1 - Peroxidase (EC 1.11.1.7) 6e-4 At5g05340 peroxidase, putative C.G. S.X.
0.12 1e-13 79 Os03g0339300 AK061545.1 - Peroxidase (EC 1.11.1.7) 5e-1 At1g14550 anionic peroxidase, putative C.G. S.X.
0.07 6e-15 83 Os03g0235000 D14482.1 - Peroxidase (EC 1.11.1.7) 7e-4 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
0.05 2e-8 61 Os07g0104600 NM_194225.1 - Haem peroxidase, plant/fungal/bacterial familyprotein 5e-1 At3g01190 peroxidase 27 (PER27) (P27) (PRXR7) C.G. S.X.
0.03 2e-8 61 Os05g0499400 AK068896.1 - - 1e-2 At3g01190 peroxidase 27 (PER27) (P27) (PRXR7) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 7e-4 46 Arabidopsis thaliana At3g50990 824263 electron carrier/ heme binding / peroxidase F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO - - - C.G. S.X.
0.03 6e-2 40 Glycine max Gma.17816.2.S1_s_at BE020641 - - 2e-10 At1g68850 peroxidase, putative C.G. S.X.
0.32 2e-42 173 Hordeum vulgare Contig2112_at Contig2112 - - 1e-8 At1g44970 peroxidase, putative C.G. S.X.
0.03 2e-1 38 Populus trichocarpa PtpAffx.225092.1.S1_at pmrna44190 hypothetical protein - 8e-9 At2g41480 electron carrier/ heme binding / peroxidase C.G. S.X.
0.27 7e-32 139 Triticum aestivum Ta.5385.1.S1_at X85228.1 peroxidase - 9e-1 At5g05340 peroxidase, putative C.G. S.X.
0.03 3e-3 42 Vitis vinifera 1621431_at CF205258.1 Peroxidase 4 - 6e-3 At5g05340 peroxidase, putative C.G. S.X.
0.28 3e-32 139 Zea mays Zm.405.1.A1_at AF037034.2 hypothetical LOC541674 - 2e-1 At5g05340 peroxidase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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