CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0677100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.93 99.2 Os07g0677100 AF014468.1 - Peroxidase 2e-4 At5g05340 peroxidase, putative S.X. H.G.
0.22 19.4 Os12g0520200 CB675503 - Phenylalanine ammonia-lyase (EC 4.3.1.5)(Fragment) 2e-5 At3g53260 PAL2 S.X. H.G.
0.03 1.4 Os10g0415800 AK066318.1 - Acylamino acid-releasing enzyme 4e-4 At4g14570 acylaminoacyl-peptidase-related S.X. H.G.
0.02 1.0 Os01g0855200 AK066597.1 - TPR-like domain containing protein 8e-2 At5g56840 DNA-binding family protein S.X. H.G.
0.02 1.0 Os03g0323200 AK062262.1 - CobN/magnesium chelatase family protein 2e-56 At5g13630 GUN5 (GENOMES UNCOUPLED 5) S.X. H.G.
0.02 1.0 Os05g0291700 AK108453.1 - Conserved hypothetical protein 7e-1 At1g79810 TED3 (REVERSAL OF THE DET PHENOTYPE 3) S.X. H.G.
0.02 1.0 Os03g0138700 AK072119.1 - TGF-beta receptor, type I/II extracellular regionfamily protein 7e-2 At5g46050 PTR3 (PEPTIDE TRANSPORTER 3) S.X. H.G.
0.01 0.5 Os07g0677200 AF014467.1 - Peroxidase 3e-6 At5g05340 peroxidase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
54.7 99.9 GSM159184 Y Leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
20.7 99.2 GSM421672 XOC, 4 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
15.0 98.6 GSM159182 Mature leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
14.8 98.6 GSM421692 XOO, 4 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.9 98.4 GSM421693 XOO, 4 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.7 98.4 GSM159183 Y Leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
12.6 98.4 GSM421689 XOO, 2 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.5 98.3 GSM421668 XOC, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.8 98.3 GSM421671 XOC, 4 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.6 98.2 GSM421719 MOCK, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.47 5e-111 402 Os07g0677200 AF014467.1 - Peroxidase 3e-6 At5g05340 peroxidase, putative C.G. S.X.
0.46 2e-113 410 Os07g0677300 D16442.1 - Peroxidase 2e-4 At3g50990 electron carrier/ heme binding / peroxidase C.G. S.X.
0.44 2e-54 214 Os07g0677500 AF247700.2 - Peroxidase POC1 2e-4 At5g05340 peroxidase, putative C.G. S.X.
0.40 3e-63 244 Os07g0676900 AK072862.1 - Peroxidase (EC 1.11.1.7) 6e-4 At5g05340 peroxidase, putative C.G. S.X.
0.39 5e-46 186 Os07g0677400 AF014469.1 - Peroxidase 7e-4 At3g50990 electron carrier/ heme binding / peroxidase C.G. S.X.
0.19 2e-21 105 Os03g0339300 AK061545.1 - Peroxidase (EC 1.11.1.7) 5e-1 At1g14550 anionic peroxidase, putative C.G. S.X.
0.12 7e-27 123 Os04g0651000 AK108994.1 - Peroxidase 3e-3 At5g58400 peroxidase, putative C.G. S.X.
0.03 9e-14 79 Os07g0499500 AK108797.1 - Peroxidase 7 precursor (EC 1.11.1.7) (Atperox P7)(ATP30) 1e-2 At1g30870 cationic peroxidase, putative C.G. S.X.
0.03 1e-12 75 Os01g0327100 AK070715.1 - Haem peroxidase, plant/fungal/bacterial familyprotein 5e-2 At1g44970 peroxidase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 2e-4 48 Arabidopsis thaliana At5g05340 830416 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:apoplast, cell wall;PFOBM - - - C.G. S.X.
0.06 1e-3 46 Glycine max Gma.17816.2.S1_s_at BE020641 - - 2e-10 At1g68850 peroxidase, putative C.G. S.X.
0.47 2e-45 182 Hordeum vulgare Contig2118_at Contig2118 - - 2e-3 At3g32980 peroxidase 32 (PER32) (P32) (PRXR3) C.G. S.X.
0.04 6e-5 50 Populus trichocarpa PtpAffx.206163.1.S1_at pmrna12232 hypothetical protein - 5e-13 At2g41480 electron carrier/ heme binding / peroxidase C.G. S.X.
0.36 6e-35 149 Triticum aestivum Ta.8955.1.S1_at X85227.1 pox1 protein - 2e-1 At5g05340 peroxidase, putative C.G. S.X.
0.03 3e-3 42 Vitis vinifera 1621431_at CF205258.1 Peroxidase 4 - 6e-3 At5g05340 peroxidase, putative C.G. S.X.
0.44 6e-67 254 Zea mays Zm.2707.1.S1_at BG842199 - - 2e-1 At5g05340 peroxidase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006979 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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