CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0673700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os07g0673700 AK071934.1 - Cyclin-like F-box domain containing protein 4e+0 At3g43583 unknown protein S.X. H.G.
0.43 55.4 Os08g0478100 AK063259.1 - Protein of unknown function UPF0029 family protein 2e-4 At4g38090 unknown protein S.X. H.G.
0.40 51.1 Os03g0684000 AK105025.2 - Zn-finger, GATA type domain containing protein 1e-2 At3g21175 ZML1 (ZIM-LIKE 1) S.X. H.G.
0.40 51.1 Os12g0103000 AK068622.1 - Mitochondrial substrate carrier family protein 3e-16 At2g35800 mitochondrial substrate carrier family protein S.X. H.G.
0.31 34.5 Os04g0577500 AK065648.1 - TatD-related deoxyribonuclease family protein 2e-4 At5g17570 tatD-related deoxyribonuclease family protein S.X. H.G.
0.21 17.9 Os02g0123400 9630.m00227 - Conserved hypothetical protein 1e+0 At1g73970 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.8 99.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
6.7 97.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.6 96.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.0 96.6 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.8 96.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.6 96.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.0 95.9 GSM278854 KT95-418-non-infected, biological rep2 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
3.7 95.6 GSM278850 KT95-418-RSV infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
3.5 95.3 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.3 95.1 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-3 44 Os02g0202900 9630.m01008 - Cyclin-like F-box domain containing protein 2e-1 At3g44950 glycine-rich protein C.G. S.X.
0.01 1e-1 40 Os02g0211000 9630.m01080 - Viral coat and capsid protein family protein 2e-9 At3g47780 ATATH6 C.G. S.X.
0.01 5e-1 38 Os01g0762500 BI803155 - - 5e+0 At4g30750 unknown protein C.G. S.X.
0.01 5e-1 38 Os02g0525600 AK060671.1 - Conserved hypothetical protein 2e-1 At1g01490 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 5e-1 38 Os03g0257700 AK110865.1 - Hypothetical protein 2e-1 At2g32060 40S ribosomal protein S12 (RPS12C) C.G. S.X.
0.01 5e-1 38 Os04g0611800 AK119442.1 - Terpene synthase, metal-binding domain containingprotein 7e-9 At1g79460 GA2 (GA REQUIRING 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e+0 34 Arabidopsis thaliana At3g43583 2745931 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OPBMFVA - - - C.G. S.X.
0.02 1e+0 36 Glycine max GmaAffx.1301.132.S1_s_at BI700770 - - 2e-1 At3g16540 DegP11 (DegP protease 11) C.G. S.X.
0.02 1e-1 38 Hordeum vulgare HS08O16u_s_at HS08O16u - - 2e+1 At5g62440 - C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.249.699.S1_s_at CV273686 hypothetical protein - 1e+1 At5g62440 - C.G. S.X.
0.02 9e-1 36 Triticum aestivum Ta.5185.1.S1_at BJ278198 - - 1e+0 At3g18590 plastocyanin-like domain-containing protein C.G. S.X.
0.01 3e-1 36 Vitis vinifera 1618242_at CF512932 - - 1e+0 At4g29660 EMB2752 (EMBRYO DEFECTIVE 2752) C.G. S.X.
0.02 2e+0 34 Zea mays Zm.13487.1.A1_at AY108830.1 transposon protein - 2e-2 At5g41000 YSL4 (YELLOW STRIPE LIKE 4) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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