CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0656700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.75 91.9 Os07g0656700 AU173917 - Protein of unknown function DUF1334 family protein 4e-11 At5g13720 - S.X. H.G.
0.77 93.1 Os03g0704100 AK070474.1 - PAP fibrillin family protein 2e+0 At1g35410 - S.X. H.G.
0.60 79.7 Os11g0242400 AK067025.1 - Rieske [2Fe-2S] region domain containing protein 1e-1 At1g71500 Rieske (2Fe-2S) domain-containing protein S.X. H.G.
0.59 78.0 Os01g0912700 AK068528.1 - Conserved hypothetical protein 1e-1 At2g01340 unknown protein S.X. H.G.
0.57 77.0 Os08g0114100 AK099560.1 - Conserved hypothetical protein 4e-27 At1g64680 unknown protein S.X. H.G.
0.55 73.7 Os03g0128800 AK066570.1 - Conserved hypothetical protein 7e-1 At1g23530 unknown protein S.X. H.G.
0.50 68.0 Os07g0171100 AK066475.1 - TPR-like domain containing protein 2e-16 At1g55480 binding / protein binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.4 98.3 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
10.1 98.0 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.4 97.9 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.4 97.9 GSM174887 D FR13 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
8.4 97.7 GSM421702 XOO, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.3 97.7 GSM421706 XOO, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.7 97.6 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.7 97.6 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.2 97.4 GSM421701 XOO, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.2 97.4 GSM421682 XOC, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 2e-33 145 Os07g0656600 AK060061.1 - Protein of unknown function DUF1334 family protein 6e-13 At5g13720 - C.G. S.X.
0.03 5e-3 44 Os03g0126900 AK109217.1 - Conserved hypothetical protein 3e-1 At5g14440 - C.G. S.X.
0.02 1e-3 46 Os10g0579300 AK103692.1 - NADH:ubiquinone oxidoreductase 17.2 kD subunitfamily protein 5e-10 At3g03100 NADH:ubiquinone oxidoreductase family protein C.G. S.X.
0.02 5e-3 44 Os09g0395300 9637.m01977 - Myb, DNA-binding domain containing protein 3e-6 At5g16560 KAN (KANADI) C.G. S.X.
0.02 8e-2 40 Os02g0307900 9630.m01962 - Hypothetical protein 2e-1 At3g63310 glutamate binding C.G. S.X.
0.01 1e-3 46 Os10g0534700 AK071861.1 - Protein of unknown function DUF604 family protein 3e-4 At4g23490 fringe-related protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 4e-11 69 Arabidopsis thaliana At5g13720 831217 - F:unknown;P:unknown;C:chloroplast, chloroplast inner membrane, chloroplast envelope;BOPA - - - C.G. S.X.
0.03 2e-4 48 Glycine max Gma.8350.1.S1_at BE658497 - - 7e-2 At1g62240 unknown protein C.G. S.X.
0.41 2e-104 379 Hordeum vulgare Contig6474_s_at Contig6474 - - 4e-11 At5g13720 - C.G. S.X.
0.20 4e-15 83 Populus trichocarpa PtpAffx.723.2.S1_a_at CV277361 hypothetical protein - 2e-34 At5g13720 - C.G. S.X.
0.11 8e-22 105 Triticum aestivum TaAffx.109297.2.S1_at CA664107 - - 4e+0 At5g55210 unknown protein C.G. S.X.
0.12 3e-12 71 Vitis vinifera 1620190_at CA817971 hypothetical protein LOC100267159 - 1e-16 At5g13720 - C.G. S.X.
0.36 1e-49 196 Zea mays Zm.14159.1.A1_at AY108992.1 hypothetical protein LOC100192831 - 4e-14 At5g13720 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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