Gene omics information

Query gene ID Os07g0615200
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os07g0615200AK065604.1-ZIM domain containing protein7e-1At1g19180JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)S.X.H.G.
0.5068.0Os03g0438100AK071443.1-Allene oxide cyclase precursor (EC 5.3.99.6)(Allene oxide cylase)8e-7At3g25760AOC1 (ALLENE OXIDE CYCLASE 1)S.X.H.G.
0.2931.1Os04g0556300AY100689.1-Glutathione peroxidase-like protein GPX54Hv3e-33At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)S.X.H.G.
0.1813.7Os08g0107100AK062216.1-Conserved hypothetical protein1e-2At1g79780-S.X.H.G.
0.138.2Os08g0459600AK071203.1-12-oxophytodienoate reductase 3 (EC 1.3.1.42)2e-7At2g06050OPR3 (OPDA-REDUCTASE 3)S.X.H.G.
0.094.9Os05g0119300AK068289.1-Molluscan rhodopsin C-terminal tail family protein5e-3At5g45350proline-rich family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.096.6GSM159204Inflorescence (P6, 22 - 30 cm), biological rep 1GSE6893Expression data for reproductive development in rice
4.896.5GSM159206Inflorescence (P6, 22 - 30 cm), biological rep 3GSE6893Expression data for reproductive development in rice
4.796.4GSM159205Inflorescence (P6, 22 - 30 cm), biological rep 2GSE6893Expression data for reproductive development in rice
4.396.1GSM278849WuYun3-non-infected, biological rep3GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
4.196.0GSM278848WuYun3-non-infected, biological rep2GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
3.795.6GSM255763antiOsLIC collar chipGSE12097antiOsLIC collar chip
3.695.5GSM278850KT95-418-RSV infected, biological rep1GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
3.495.2GSM278844WuYun3-RSV infected, biological rep1GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
3.395.1GSM173080Rice MH63 Control2GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
3.395.1GSM278847WuYun3-non-infected, biological rep1GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.245e-31137Os03g0402800AK061842.1-ZIM domain containing protein2e+0At1g19180JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)C.G.S.X.
0.065e-344Os03g0180900AK073589.1-ZIM domain containing protein1e-1At3g22275unknown proteinC.G.S.X.
0.021e-346Os03g01945009631.m00889-Mitochondrial import inner membrane translocase,subunit Tim17/22 family protein1e-1At4g26670mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinC.G.S.X.
0.025e-344Os05g0584400AK106631.1-Conserved hypothetical protein2e+0At5g55570unknown proteinC.G.S.X.
0.022e-242Os10g05145009638.m03307-Cytochrome P450 family protein8e-1At1g64930CYP89A7C.G.S.X.
0.014e-448Os04g0398000CA760782-Pathogenesis-related transcriptional factor andERF domain containing protein4e+0At3g14340unknown proteinC.G.S.X.
0.015e-344Os11g0633700BU666935--1e+0At2g17785zinc-binding protein-relatedC.G.S.X.
0.012e-242Os01g0196000NM_188240.1--3e-1At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-136Arabidopsis thalianaAt1g19180838501JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.---C.G.S.X.
0.056e-550Glycine maxGmaAffx.93484.1.S1_atCF809209--4e-9At1g19180JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)C.G.S.X.
0.362e-54212Hordeum vulgareContig3743_atContig3743--8e-4At1g19180JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)C.G.S.X.
0.029e-136Populus trichocarpaPtpAffx.54756.1.S1_atBU830852hypothetical protein-2e-1At1g76070unknown proteinC.G.S.X.
0.343e-43176Triticum aestivumTa.9485.1.S1_atCD890851--7e-4At1g19180JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)C.G.S.X.
0.051e-240Vitis vinifera1613770_s_atCB971597hypothetical protein LOC100254231-1e-2At1g74950TIFY10BC.G.S.X.
0.393e-44178Zea maysZm.17088.1.A1_atBM497690pnFL-2-4e-2At1g19180JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006810The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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