CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0600200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os07g0600200 AK105814.1 - Conserved hypothetical protein 5e+0 At5g55750 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.57 77.0 Os07g0599500 AK068696.1 - Conserved hypothetical protein 2e+0 At5g42504 unknown protein S.X. H.G.
0.56 76.3 Os07g0668300 AK061122.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At2g23540 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.50 68.0 Os07g0599900 CF291190 - Conserved hypothetical protein 1e-1 At5g09530 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.50 68.0 Os07g0599700 AK065663.1 - Surface protein PspC 6e+0 At5g09480 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.33 38.8 Os07g0677600 AK060984.1 - Cationic peroxidase 1e-2 At5g39580 peroxidase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
35.0 99.8 GSM262002 IAC165, 4 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
30.6 99.7 GSM262003 IAC165, 4 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
21.8 99.2 GSM262006 IAC165, 11 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
19.4 99.0 GSM262007 IAC165, 11 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
18.3 98.9 GSM261998 IAC165, 2 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
17.1 98.8 GSM262011 Nipponbare, 2 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
14.4 98.6 GSM262010 Nipponbare, 2 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
13.4 98.5 GSM261999 IAC165, 2 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.3 98.1 GSM262012 Nipponbare, 2 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
9.3 97.9 GSM262018 Nipponbare, 11 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-3 44 Os07g0599900 CF291190 - Conserved hypothetical protein 1e-1 At5g09530 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.05 1e-2 42 Os07g0599700 AK065663.1 - Surface protein PspC 6e+0 At5g09480 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.03 6e-4 46 Os02g0710700 9630.m04686 - Conserved hypothetical protein 3e-2 At1g80580 ethylene-responsive element-binding family protein C.G. S.X.
0.02 1e-2 42 Os02g0122200 9630.m00214 - Conserved hypothetical protein 9e-7 At4g39030 EDS5 (ENHANCED DISEASE SUSCEPTIBILITY 5) C.G. S.X.
0.02 1e-2 42 Os08g0107300 9636.m00059 - Glycoside hydrolase, family 28 protein 3e+0 At3g06770 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein C.G. S.X.
0.02 1e-2 42 Os08g0176900 AK107028.1 - - 1e+0 At5g17080 cathepsin-related C.G. S.X.
0.02 1e-2 42 Os08g0177000 AK107399.1 - Conserved hypothetical protein 2e-1 At3g43520 unknown protein C.G. S.X.
0.01 1e-2 42 Os07g0511500 AK119665.1 - SNF2-related domain containing protein 1e-9 At1g05120 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 5e+0 32 Arabidopsis thaliana At5g55750 835669 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVA - - - C.G. S.X.
0.03 4e-1 36 Glycine max PsAffx.psZG007xK19f_at PsAffx.psZG007xK19f - - 9e-7 At4g31420 zinc finger (C2H2 type) family protein C.G. S.X.
0.10 4e-2 38 Hordeum vulgare Contig13686_at Contig13686 - - 1e+0 At2g35640 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.210882.1.S1_at pmrna21368 hypothetical protein - 1e-2 At5g11930 glutaredoxin family protein C.G. S.X.
0.08 2e-2 40 Triticum aestivum TaAffx.124515.1.A1_at CK216665 - - 3e-1 At2g36690 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1619140_at CF606031 hypothetical protein LOC100246049 - 4e-4 At2g35270 DNA-binding protein-related C.G. S.X.
0.19 4e-8 57 Zea mays Zm.17001.1.A1_at CK827163 hypothetical protein LOC100275855 - 5e+0 At5g65480 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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