CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0573400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os07g0573400 AK121705.1 - Protein of unknown function DUF239 domaincontaining protein 8e-42 At3g13510 unknown protein S.X. H.G.
0.84 96.0 Os03g0266800 AK100780.1 - Protein kinase domain containing protein 7e-27 At1g31420 FEI1 (FEI 1) S.X. H.G.
0.81 94.8 Os03g0833800 AK066209.1 - Glycoside hydrolase, family 28 protein 1e-3 At3g62110 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein S.X. H.G.
0.78 93.4 Os07g0109400 AK070584.1 - Conserved hypothetical protein 5e-1 At1g55530 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.67 87.2 Os04g0683600 AK065557.1 - Receptor kinase-like protein 3e-7 At1g63430 leucine-rich repeat transmembrane protein kinase, putative S.X. H.G.
0.61 81.2 Os07g0681700 AK103213.1 - Glycosyl transferase, family 8 protein 9e-2 At2g38650 GAUT7 (GALACTURONOSYLTRANSFERASE 7) S.X. H.G.
0.58 77.0 Os07g0501800 AK102299.1 - Hypothetical protein 3e-4 At1g28340 AtRLP4 (Receptor Like Protein 4) S.X. H.G.
0.56 76.3 Os01g0195200 AK105501.1 - Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1) 3e-10 At2g20300 ALE2 (Abnormal Leaf Shape 2) S.X. H.G.
0.56 76.3 Os01g0969100 AK070623.1 - Conserved hypothetical protein 9e-75 At1g08200 AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2) S.X. H.G.
0.51 68.7 Os03g0328000 AK059469.1 - Adapter protein SPIKE1 2e-44 At4g16340 SPK1 (SPIKE1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.4 97.5 GSM302922 seedling_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
7.2 97.4 GSM302918 leaf_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
7.1 97.4 GSM302923 seedling_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
7.0 97.4 GSM429984 Rice wild-type panicle rep2 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
6.8 97.3 GSM302919 leaf_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
6.4 97.2 GSM99879 TCHW P21_ir29 control, biological rep3 GSE4438 Expression data from rice under salinity stress
5.7 96.9 GSM99867 TCHW P10_ir29 salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
5.6 96.9 GSM429982 Rice wild-type panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
5.6 96.9 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
5.3 96.7 GSM159187 SAM, biological rep 2 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 5e-88 327 Os07g0205500 AK103449.1 - Protein of unknown function DUF239 domaincontaining protein 8e-23 At3g13510 unknown protein C.G. S.X.
0.23 3e-49 198 Os03g0807100 CR283495 - Protein of unknown function DUF239 domaincontaining protein 2e-12 At1g55360 unknown protein C.G. S.X.
0.18 3e-12 75 Os01g0550800 AK064194.1 - Protein of unknown function DUF239 domaincontaining protein 2e-4 At2g19360 unknown protein C.G. S.X.
0.04 4e-8 61 Os01g0170500 AK106837.1 - Protein of unknown function DUF239 domaincontaining protein 3e-19 At5g50150 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 8e-42 173 Arabidopsis thaliana At3g13510 820553 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PFB - - - C.G. S.X.
0.26 1e-38 163 Glycine max GmaAffx.89865.1.A1_s_at CK606142 - - 1e-39 At3g13510 unknown protein C.G. S.X.
0.31 1e-106 387 Hordeum vulgare Contig5272_s_at Contig5272 - - 4e-1 At3g13510 unknown protein C.G. S.X.
0.28 2e-40 169 Populus trichocarpa PtpAffx.8523.1.S1_at CV239620 hypothetical protein - 9e-106 At1g55360 unknown protein C.G. S.X.
0.41 0 852 Triticum aestivum Ta.30520.1.S1_at CA635767 - - 8e-20 At1g55360 unknown protein C.G. S.X.
0.12 1e-56 220 Vitis vinifera 1620804_at CD797824 hypothetical protein LOC100267227 - 3e-114 At1g55360 unknown protein C.G. S.X.
0.44 0 902 Zea mays Zm.10376.1.S1_at BQ538350 - - 2e-11 At3g13510 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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