CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0569600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.70 88.4 Os07g0569600 AK067599.1 - Conserved hypothetical protein 7e-12 At5g19855 unknown protein S.X. H.G.
0.53 71.3 Os09g0530000 AK062568.1 - Rhodanese-like domain containing protein 2e-7 At4g27700 rhodanese-like domain-containing protein S.X. H.G.
0.50 68.0 Os01g0810300 U37936.1 - Calmodulin-like protein 4e-20 At3g43810 CAM7 (CALMODULIN 7) S.X. H.G.
0.50 68.0 Os06g0136600 AK069316.1 - Enolase 1 (EC 4.2.1.11) (2-phosphoglyceratedehydratase 1) (2-phospho- D-glycerate hydro-lyase 1) 9e-47 At2g36530 LOS2 S.X. H.G.
0.48 63.7 Os07g0476900 AK066045.1 - Thioredoxin-related domain containing protein 1e-1 At1g76080 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) S.X. H.G.
0.40 51.1 Os03g0695500 CB636267 - Protein of unknown function DUF1517 family protein 1e+0 At1g54520 unknown protein S.X. H.G.
0.38 46.9 Os09g0541000 AK104786.1 - - 1e-5 At2g37170 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2) S.X. H.G.
0.38 46.9 Os01g0237100 AK060943.1 - Phosphoglycerate/bisphosphoglycerate mutase familyprotein 1e-1 At4g00650 FRI (FRIGIDA) S.X. H.G.
0.30 32.7 Os05g0429500 AK058688.1 - Dienelactone hydrolase domain containing protein 2e+0 At1g35420 dienelactone hydrolase family protein S.X. H.G.
0.25 24.1 Os11g0150100 AK068167.1 - Phosphoglycerate/bisphosphoglycerate mutase familyprotein 6e-2 At5g22620 phosphoglycerate/bisphosphoglycerate mutase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.9 98.4 GSM421678 XOC, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.5 98.2 GSM421717 MOCK, 8 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.5 98.2 GSM267998 Yellow leaves in F9Y RILs from parents lines GSE10872 Molecular characterization and genetic analysis reveal SA0420 as an early senescing rice mutant with pleotropic
11.2 98.2 GSM421698 XOO, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.0 97.8 GSM421716 MOCK, 8 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.8 97.8 GSM154952 Leaf_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
8.7 97.8 GSM154953 Leaf_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
8.4 97.7 GSM421715 MOCK, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.1 97.7 GSM421718 MOCK, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.9 97.6 GSM421695 XOO, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 1e-15 85 Os03g0807900 AK060962.1 - Conserved hypothetical protein 2e-16 At5g19855 unknown protein C.G. S.X.
0.07 3e-9 63 Os02g0517150 9630.m02996 - - 7e-8 At3g11420 fringe-related protein C.G. S.X.
0.06 5e-8 59 Os03g0394750 NM_192239.1 - - 7e+0 At5g64400 - C.G. S.X.
0.03 3e-3 44 Os02g0478500 9630.m02636 - Zn-finger, CCHC type domain containing protein 9e-5 At5g22630 ADT5 (arogenate dehydratase 5) C.G. S.X.
0.01 2e-4 48 Os08g0379200 AK108698.1 - Hypothetical protein 2e-12 At1g68710 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 7e-12 71 Arabidopsis thaliana At5g19855 832106 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BPO - - - C.G. S.X.
0.05 4e-2 40 Glycine max Gma.3420.1.S1_at CD406082 - - 5e-17 At5g19855 unknown protein C.G. S.X.
0.37 3e-40 165 Hordeum vulgare HV_CEb0010O21r2_at HV_CEb0010O21r2 - - 1e-6 At5g19855 unknown protein C.G. S.X.
0.08 1e-7 57 Populus trichocarpa PtpAffx.39050.2.S1_at CK090154 hypothetical protein - 4e-25 At5g19855 unknown protein C.G. S.X.
0.42 2e-31 137 Triticum aestivum Ta.7806.1.A1_at BJ230365 - - 1e-6 At5g19855 unknown protein C.G. S.X.
0.03 3e-2 38 Vitis vinifera 1622232_at CK138167.1 - - 2e-27 At5g19855 unknown protein C.G. S.X.
0.12 5e-8 57 Zea mays Zm.17712.1.S1_at CK370052 hypothetical protein LOC100275406 - 8e-20 At5g19855 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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