CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0565800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os07g0565800 AK062834.1 - Conserved hypothetical protein 2e+0 At3g25577 unknown protein S.X. H.G.
0.77 93.1 Os10g0551700 AK107851.1 - Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein 7e-3 At2g35960 NHL12 S.X. H.G.
0.67 87.2 Os01g0753800 AK121555.1 - Conserved hypothetical protein 3e+0 At5g47640 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2) S.X. H.G.
0.67 87.2 Os02g0816200 AK060243.1 - Lipolytic enzyme, G-D-S-L family protein 2e-4 At3g04290 LTL1 (LI-TOLERANT LIPASE 1) S.X. H.G.
0.67 87.2 Os01g0814100 AK061173.1 - Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein 5e-1 At2g14170 ALDH6B2 S.X. H.G.
0.67 87.2 Os01g0652000 NM_192389.1 - - 1e-3 At4g18570 proline-rich family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
16.2 98.8 GSM159203 Inflorescence (P5, 15 - 22 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
14.3 98.6 GSM159202 Inflorescence (P5, 15 - 22 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
13.2 98.4 GSM159201 Inflorescence (P5, 15 - 22 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
12.9 98.4 GSM99866 TCHW P9_ir29 control, biological rep3 GSE4438 Expression data from rice under salinity stress
11.7 98.2 GSM99878 TCHW P20_ir29 control, biological rep2 GSE4438 Expression data from rice under salinity stress
11.6 98.2 GSM429984 Rice wild-type panicle rep2 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
10.7 98.1 GSM99881 TCHW P23_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
10.5 98.1 GSM99864 TCHW P7_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
10.2 98.0 GSM99879 TCHW P21_ir29 control, biological rep3 GSE4438 Expression data from rice under salinity stress
10.1 98.0 GSM99860 TCHW P3_m103 control, biological rep3 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-2 40 Os01g0309800 AK110758.1 - Heavy metal transport/detoxification proteindomain containing protein 4e-2 At2g41260 M17 C.G. S.X.
0.03 2e-1 38 Os12g0473000 9640.m02772 - - 4e-1 At3g11640 unknown protein C.G. S.X.
0.03 2e-1 38 Os12g0570400 9640.m03718 - Hypothetical protein 1e+0 At3g09032 unknown protein C.G. S.X.
0.02 1e-2 42 Os07g0131600 AK068296.1 - Monosaccharide transporter 3 4e-9 At1g11260 STP1 (SUGAR TRANSPORTER 1) C.G. S.X.
0.02 2e-1 38 Os10g0350800 NM_195943.1 - Hypothetical protein 2e+0 At1g18680 HNH endonuclease domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At3g25577 6241497 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.03 1e-1 38 Glycine max GmaAffx.71827.1.A1_at BE661692 - - 5e-5 At2g01410 - C.G. S.X.
0.26 4e-33 141 Hordeum vulgare Contig7650_at Contig7650 - - 1e+0 At5g13160 PBS1 (avrPphB susceptible 1) C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.221326.1.S1_s_at pmrna38133 hypothetical protein - 5e-1 At3g13672 seven in absentia (SINA) family protein C.G. S.X.
0.23 3e-23 109 Triticum aestivum Ta.21881.2.S1_at CA701020 - - 3e-1 At3g26400 EIF4B1 C.G. S.X.
0.03 1e-1 36 Vitis vinifera 1615448_at CF568935 - - 1e-61 At5g59910 HTB4 C.G. S.X.
0.21 2e-34 145 Zea mays Zm.2377.1.S1_at AY104113.1 hypothetical protein LOC100191708 - 3e+1 Atmg01260 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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