Gene omics information

Query gene ID Os07g0548300
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8395.8Os07g0548300NM_185739.1-CRP14e-6At5g42310pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.9198.9Os01g0637600AK106980.1-Peptide deformylase, chloroplast precursor (EC3.5.1.88) (PDF) (Polypeptide deformylase)6e-10At5g14660PDF1B (PEPTIDE DEFORMYLASE 1B)S.X.H.G.
0.7391.1Os11g05924009639.m03445-Protein of unknown function UPF0044 family protein2e-6At4g14510RNA bindingS.X.H.G.
0.6787.2Os02g0169900AK070107.1-Inositol monophosphatase family protein9e-22At1g31190IMPL1 (MYO-INOSITOL MONOPHOSPHATASE LIKE 1)S.X.H.G.
0.6787.2Os10g0493900AK071193.1-Protein of unknown function DUF6 domain containingprotein7e-11At3g02690integral membrane family proteinS.X.H.G.
0.4762.3Os01g0764500AK120433.1-Hypothetical protein2e-1At2g11910unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.098.0GSM207565Mudanjiang8 wild type control rep1GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
9.097.8GSM207564Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
8.997.8GSM207566Mudanjiang8 wild type control rep2GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
8.597.7GSM421678XOC, 8 hai - rep4GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.297.7GSM421698XOO, 8 hai - rep4GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.197.7GSM207560Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
7.997.6GSM207567Mudanjiang8 wild type control rep3GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
7.997.6GSM207562Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
7.997.6GSM207563Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
7.397.5GSM207558Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-346Os01g0628000AK109274.1-Cytochrome P450 family protein4e-1At1g54410dehydrin family proteinC.G.S.X.
0.022e-346Os05g0362500AK073380.1-Protein of unknown function DUF538 family protein5e-1At4g02370unknown proteinC.G.S.X.
0.028e-344Os01g0270100AK104155.1-Cysteine proteinase inhibitor2e-3At3g12490cysteine protease inhibitor, putative / cystatin, putativeC.G.S.X.
0.028e-344Os02g0551600AK063102.1-Conserved hypothetical protein2e+0At4g24026unknown proteinC.G.S.X.
0.022e-138Os05g0103000AK065864.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein4e-30At5g50915basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.023e+034Os01g0678900AK107736.1-Hypothetical protein2e+0At3g46830ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C)C.G.S.X.
0.023e+034Os03g0321300AK071172.1-Cyclin-like F-box domain containing protein8e-1At1g78100F-box family proteinC.G.S.X.
0.012e-346Os02g0461900AK119466.1-Hypothetical protein3e-4At4g14905kelch repeat-containing F-box family proteinC.G.S.X.
0.012e-346Os09g04076009637.m02072-DNA mismatch repair protein MutS, C-terminaldomain containing protein4e-17At4g02070MSH6 (MUTS HOMOLOG 6)C.G.S.X.
0.014e-240Os11g05904009639.m03431-Disease resistance protein family protein3e-1At3g12960unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.074e-654Arabidopsis thalianaAt5g42310834236pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:unknown;C:chloroplast;POMFBA---C.G.S.X.
0.064e-1067Glycine maxGma.10592.1.S1_atBG838982--3e-11At5g42310pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.167e-34145Hordeum vulgareContig11634_atContig11634--2e+0At3g43180zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.083e-1791Populus trichocarpaPtpAffx.205868.1.S1_atpmrna11635hypothetical protein-3e-44At5g42310pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.021e-346Triticum aestivumTaAffx.62985.1.S1_atBQ237573--1e-1At1g79975-C.G.S.X.
0.021e+034Vitis vinifera1620940_atCF201899.1--2e+1At5g66990RWP-RK domain-containing proteinC.G.S.X.
0.550658Zea maysZm.4626.1.S1_atAF073522.1chloroplast RNA processing1-1e+0At4g15955epoxide hydrolase-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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