CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0543300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os07g0543300 BM418911 - Glycoside hydrolase, family 14B, plant protein 2e+1 At5g43401 - S.X. H.G.
0.53 71.3 Os08g0279900 9636.m01788 - - 2e-1 At1g74140 - S.X. H.G.
0.50 68.0 Os11g0638700 CA766587 - Conserved hypothetical protein 1e+0 At5g66490 unknown protein S.X. H.G.
0.50 68.0 Os04g0657600 AK119428.1 - Cyclin-like F-box domain containing protein 3e+0 At4g01600 GRAM domain-containing protein / ABA-responsive protein-related S.X. H.G.
0.46 60.9 Os09g0489800 AK119382.1 - Hypothetical protein 6e-3 At5g06950 AHBP-1B S.X. H.G.
0.40 51.1 Os04g0177000 9632.m00847 - Protein kinase domain containing protein 1e-4 At5g38250 serine/threonine protein kinase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
38.8 99.8 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
34.8 99.8 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.0 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.2 99.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.4 99.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.1 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.4 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.7 99.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.6 99.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.5 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 2e-30 135 Os07g0543100 9635.m03546 - Beta-amylase (EC 3.2.1.2) 6e-8 At4g15210 BAM5 (BETA-AMYLASE 5) C.G. S.X.
0.11 7e-15 83 Os01g0756166 NM_191281.1 - - 1e+1 At5g57290 60S acidic ribosomal protein P3 (RPP3B) C.G. S.X.
0.06 1e-7 59 Os10g0565200 NM_197783.1 - Beta-amylase PCT-BMYI (EC 3.2.1.2) 1e-3 At3g23920 BAM1 (BETA-AMYLASE 1) C.G. S.X.
0.04 4e-13 77 Os10g0465700 AK067249.1 - Beta-amylase (AT3g23920/F14O13_11) 2e-11 At3g23920 BAM1 (BETA-AMYLASE 1) C.G. S.X.
0.04 4e-10 67 Os03g0141200 AK068968.1 - Glycoside hydrolase, family 14B, plant protein 3e-10 At4g17090 CT-BMY (CHLOROPLAST BETA-AMYLASE) C.G. S.X.
0.02 5e-1 36 Os02g0127700 AK060422.1 - Phosphoribosyl pyrophosphate synthase (EC 2.7.6.1) 1e-73 At2g44530 ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putative C.G. S.X.
0.01 8e+0 32 Os05g0256500 9633.m01499 - Protein kinase domain containing protein 4e-7 At1g53430 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.01 8e+0 32 Os05g0481800 AK110987.1 - Hypothetical protein 2e+0 At4g03510 RMA1 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e+1 30 Arabidopsis thaliana At5g43401 3771414 - Encodes a defensin-like (DEFL) family protein. - - - C.G. S.X.
0.04 1e+0 34 Glycine max GmaAffx.40706.1.S1_at BG237889 - - 2e+0 At5g41960 unknown protein C.G. S.X.
0.10 2e-15 81 Hordeum vulgare Contig1411_s_at Contig1411 - - 6e-5 At4g15210 BAM5 (BETA-AMYLASE 5) C.G. S.X.
0.04 5e+0 32 Populus trichocarpa PtpAffx.206678.1.S1_at pmrna13248 hypothetical protein - 2e+0 At1g53670 MSRB1 (methionine sulfoxide reductase B 1) C.G. S.X.
0.14 3e-4 46 Triticum aestivum Ta.27780.2.A1_a_at BJ243011 - - 6e+0 At5g15940 binding / catalytic/ oxidoreductase C.G. S.X.
0.05 5e+0 30 Vitis vinifera 1620691_at AY427150.1 - - 1e-3 At4g28670 protein kinase family protein C.G. S.X.
0.05 1e-10 65 Zea mays Zm.80.1.A1_at CD972407 beta-amylase - 6e-2 At2g32290 BAM6 (BETA-AMYLASE 6) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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