CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0526400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.43 55.4 Os07g0526400 BI806666 - Chalcone synthase (EC 2.3.1.74)(Naringenin-chalcone synthase) 4e+0 At3g21920 pollen coat receptor kinase, putative S.X. H.G.
0.31 34.5 Os02g0719600 AK070415.1 - SAM dependent carboxyl methyltransferase familyprotein 8e-1 At5g01900 WRKY62 S.X. H.G.
0.16 11.3 Os12g0559200 BM421235 - Lipoxygenase (EC 1.13.11.12) 2e+0 At5g57750 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.10 5.7 Os01g0117600 AK065867.1 - - 3e-4 At3g07070 protein kinase family protein S.X. H.G.
0.06 3.0 Os06g0725200 AK065261.1 - Lipolytic enzyme, G-D-S-L family protein 2e-1 At5g66370 unknown protein S.X. H.G.
0.02 1.0 Os12g0283400 AK110798.1 - Glutelin family protein 2e+0 At2g23550 MES6 (METHYL ESTERASE 6) S.X. H.G.
0.02 1.0 Os09g0517100 AK100778.1 - Disease resistance protein family protein 5e-1 At1g75550 glycine-rich protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
28.3 99.6 GSM255763 antiOsLIC collar chip GSE12097 antiOsLIC collar chip
27.9 99.6 GSM154957 Leaf_control_replicate 1 GSE6720 Gene expression in OsRR6-overexpression line
23.1 99.3 GSM154958 Leaf_control_replicate 2 GSE6720 Gene expression in OsRR6-overexpression line
21.7 99.2 GSM375769 gid2-1_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
17.9 98.9 GSM375770 gid2-1_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
16.6 98.8 GSM375772 gid2-1_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
15.4 98.7 GSM375765 gid1-3_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
15.0 98.6 GSM159196 Inflorescence (P3, 5 - 10 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
14.6 98.6 GSM255762 wt collar chip GSE12097 antiOsLIC collar chip
14.1 98.5 GSM262020 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Os01g0743600 CB629272 - Peptidase S16, lon N-terminal domain containingprotein 2e+0 At4g02620 vacuolar ATPase subunit F family protein C.G. S.X.
0.02 2e+0 34 Os08g0111300 AK110905.1 - Transferase family protein 2e-1 At5g17340 unknown protein C.G. S.X.
0.01 1e-1 38 Os05g0283600 AK106958.1 - The start codon is not identified. 6e+0 At5g49015 Expressed protein C.G. S.X.
0.01 2e+0 34 Os03g0225700 AK101690.1 - Protein kinase domain containing protein 3e-4 At5g66790 protein kinase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e+0 32 Arabidopsis thaliana At3g21920 821747 pollen coat receptor kinase, putative F:molecular_function unknown;P:biological_process unknown;C:extracellular region;P - - - C.G. S.X.
0.04 5e+0 32 Glycine max Gma.2074.2.A1_at AW350766 - - 3e+0 At5g15581 unknown protein C.G. S.X.
0.03 5e-1 34 Hordeum vulgare HU10L19u_at HU10L19u - - 4e+0 At5g60400 unknown protein C.G. S.X.
0.04 1e+0 34 Populus trichocarpa PtpAffx.84233.1.A1_at CK094686 - - 6e-1 At1g30060 COP1-interacting protein-related C.G. S.X.
0.07 1e+0 34 Triticum aestivum TaAffx.72705.1.A1_at CK163761 - - 5e+0 At3g05760 nucleic acid binding / zinc ion binding C.G. S.X.
0.03 3e-1 34 Vitis vinifera 1622784_at CK136882.1 - - 4e+0 At2g20170 unknown protein C.G. S.X.
0.04 4e-1 34 Zea mays ZmAffx.927.1.S1_at AI795433 hypothetical protein LOC100279113 - 3e+0 At3g05935 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0009058 The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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