Gene omics information

Query gene ID Os07g0501100
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os07g0501100AK110924.1-Chalcone synthase (EC 2.3.1.74)(Naregenin-chalcone synthase)2e-1At2g14247Expressed proteinS.X.H.G.
0.042.0Os02g05465009630.m03258-Conserved hypothetical protein2e+0At2g35640hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.010.5Os01g09287009629.m06954-Aminotransferase, class I and II domain containingprotein4e-18At5g23670LCB2S.X.H.G.
0.010.5Os12g0489800AK102385.1-NBS-LRR protein (Fragment)2e+0At5g63225-S.X.H.G.
0.000.1Os03g0199200AK109717.1--1e+1At4g08455BTB/POZ domain-containing proteinS.X.H.G.
0.000.1Os04g0456200CB967429-TMV induced protein 1-25e+0At5g17060ATARFB1BS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.199.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
36.599.8GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
36.399.8GSM359922Pokkali root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
32.899.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
27.399.6GSM359923Pokkali root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
18.098.9GSM375765gid1-3_ shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
17.198.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.198.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.298.8GSM375767gid1-3_ shoot_replicate 3GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
16.098.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.385e-41171Os11g05299009639.m02966-Naringenin-chalcone synthase family protein7e-1At2g17420NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)C.G.S.X.
0.252e-21105Os07g0271500AK109558.1-Chalcone synthase1e-5At5g13930TT4 (TRANSPARENT TESTA 4)C.G.S.X.
0.231e-44182Os10g01773009638.m00859-Naringenin-chalcone synthase family protein5e-1At2g03720MRH6 (morphogenesis of root hair 6)C.G.S.X.
0.205e-1687Os10g0167900NM_195038.1-Type III polyketide synthase family protein2e+0At5g24210lipase class 3 family proteinC.G.S.X.
0.131e-1999Os11g0530600AB000801.2-Chalcone synthase C2 (EC 2.3.1.74)(Naringenin-chalcone synthase C2)1e-39At5g13930TT4 (TRANSPARENT TESTA 4)C.G.S.X.
0.125e-1687Os11g05291339639.m02959--6e+0At2g15050LTPC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Arabidopsis thalianaAt2g142472745524Expressed proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;P---C.G.S.X.
0.023e-138Glycine maxGmaAffx.77637.1.S1_atBE190264--3e-44At5g13930TT4 (TRANSPARENT TESTA 4)C.G.S.X.
0.195e-1375Hordeum vulgareContig11944_atContig11944--8e-4At5g13930TT4 (TRANSPARENT TESTA 4)C.G.S.X.
0.032e-242Populus trichocarpaPtpAffx.217858.1.S1_atpmrna33283hypothetical protein-8e-2At2g28305unknown proteinC.G.S.X.
0.242e-1791Triticum aestivumTa.27553.1.S1_atBT009068.1--1e-5At5g13930TT4 (TRANSPARENT TESTA 4)C.G.S.X.
0.031e+034Vitis vinifera1610824_s_atAY059639.1stilbene synthase /// hypothetical protein LOC100254891 /// similar to Stilbene synthase 2 /// stilbene synthase 2-2e-4At5g13930TT4 (TRANSPARENT TESTA 4)C.G.S.X.
0.285e-22105Zea maysZm.15703.1.A1_atCD441403hypothetical protein LOC100272924-8e-1At2g14247Expressed proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage