CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0498400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 79.7 Os07g0498400 NM_187384.1 - Protein kinase domain containing protein 5e-10 At4g20140 GSO1 (GASSHO1) S.X. H.G.
0.46 60.9 Os04g0410600 AK121649.1 - Purple acid phosphatase 6e-8 At3g52820 PAP22 (PURPLE ACID PHOSPHATASE 22) S.X. H.G.
0.44 58.1 Os02g0707000 9630.m04653 - Monodehydroascorbate reductase, seedling isozyme(EC 1.6.5.4) (MDAR seedling) (Ascorbate free radicalreductase seedling) (AFR reductase seedling) 7e-1 At3g52880 monodehydroascorbate reductase, putative S.X. H.G.
0.22 19.4 Os05g0400500 AK062513.1 - Hypothetical protein 1e+0 At5g20100 unknown protein S.X. H.G.
0.11 6.5 Os12g0541000 9640.m03442 - Lumazine-binding protein family protein 2e+0 At5g54530 unknown protein S.X. H.G.
0.07 3.7 Os07g0586800 NM_187025.1 - Conserved hypothetical protein 7e+0 At5g62070 IQD23 (IQ-domain 23) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
50.2 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.7 99.4 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.7 98.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.6 98.7 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.6 98.6 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.7 98.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.6 98.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.8 98.4 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.7 98.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.8 98.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 3e-16 89 Os11g0233800 9639.m01209 - Protein kinase family protein 1e-16 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
0.09 3e-19 99 Os06g0589800 AK101039.1 - - 2e-6 At3g24240 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.07 8e-23 111 Os10g0114400 9638.m00154 - Protein kinase domain containing protein 5e-10 At2g01950 BRL2 (BRI1-LIKE 2) C.G. S.X.
0.06 1e-15 87 Os02g0111800 AK111191.1 - Protein kinase domain containing protein 7e-3 At1g08590 CLAVATA1 receptor kinase (CLV1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-10 67 Arabidopsis thaliana At4g20140 827760 GSO1 (GASSHO1) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis. - - - C.G. S.X.
0.02 4e-2 42 Glycine max Gma.1778.1.S1_at AW100573 - - 1e-2 At3g12610 DRT100 (DNA-DAMAGE REPAIR/TOLERATION 100) C.G. S.X.
0.03 2e-8 61 Hordeum vulgare Contig10767_at Contig10767 - - 3e-15 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
0.01 7e-1 38 Populus trichocarpa PtpAffx.223964.1.S1_at pmrna42190 hypothetical protein - 2e-1 At1g68320 MYB62 (myb domain protein 62) C.G. S.X.
0.20 2e-90 335 Triticum aestivum TaAffx.7620.1.S1_at CA655612 - - 4e+0 At3g15140 exonuclease family protein C.G. S.X.
0.02 2e-4 48 Vitis vinifera 1612516_at CB976044 hypothetical protein LOC100252647 - 8e-9 At4g39400 BRI1 (BRASSINOSTEROID INSENSITIVE 1) C.G. S.X.
0.06 6e-11 69 Zea mays Zm.1140.1.S1_at BM073428 hypothetical protein LOC100279272 - 4e-14 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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