CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0476900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.70 88.4 Os07g0476900 AK066045.1 - Thioredoxin-related domain containing protein 1e-1 At1g76080 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) S.X. H.G.
0.74 91.4 Os03g0695500 CB636267 - Protein of unknown function DUF1517 family protein 1e+0 At1g54520 unknown protein S.X. H.G.
0.71 89.6 Os09g0530000 AK062568.1 - Rhodanese-like domain containing protein 2e-7 At4g27700 rhodanese-like domain-containing protein S.X. H.G.
0.64 83.4 Os04g0514400 AK108112.1 - Peptidoglycan binding-like domain containingprotein 4e-1 At5g57070 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.63 82.7 Os03g0322600 AK067222.1 - Hypothetical protein 4e-2 At5g22340 unknown protein S.X. H.G.
0.63 82.7 Os01g0730500 AK100064.1 - Heat shock protein DnaJ family protein 2e-10 At2g42750 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.63 82.7 Os03g0210700 AK099456.1 - Hypothetical protein 2e+0 At1g17480 IQD7 (IQ-domain 7) S.X. H.G.
0.57 77.0 Os01g0501700 AB050885.1 - OsTATC protein 1e-21 At2g01110 APG2 (ALBINO AND PALE GREEN 2) S.X. H.G.
0.53 71.3 Os11g0150100 AK068167.1 - Phosphoglycerate/bisphosphoglycerate mutase familyprotein 6e-2 At5g22620 phosphoglycerate/bisphosphoglycerate mutase family protein S.X. H.G.
0.47 62.3 Os03g0850600 AK067191.1 - Conserved hypothetical protein 6e-1 At5g42450 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.2 98.3 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.9 98.1 GSM174889 H FR13 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
10.5 98.1 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.3 98.1 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.2 98.0 GSM174886 F FR13 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.2 97.9 GSM159180 Mature leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
8.8 97.8 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
8.8 97.8 GSM159181 Mature leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
7.7 97.6 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
7.7 97.6 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-3 46 Os06g0683000 AK120010.1 - Zn-finger, C2H2 type domain containing protein 2e-5 At4g27240 zinc finger (C2H2 type) family protein C.G. S.X.
0.02 2e-2 42 Os03g0244200 AK101837.1 - Thaumatin-like protein 2e-5 At1g20030 pathogenesis-related thaumatin family protein C.G. S.X.
0.02 2e-2 42 Os04g0673400 9632.m05639 - Uracil-DNA glycosylase (EC 3.2.2.-) (UDG) 3e-9 At3g18630 uracil DNA glycosylase family protein C.G. S.X.
0.01 2e-2 42 Os04g0480500 AK119334.1 - Leucine-rich repeat, plant specific containingprotein 1e-1 At1g48620 HON5 (High Mobility Group Family A 5) C.G. S.X.
0.01 2e-2 42 Os07g0227300 9635.m01226 - - 4e+0 At5g01881 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-1 38 Arabidopsis thaliana At1g76080 843940 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) Encodes a thioredoxin localized in chloroplast stroma. Known as CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD). - - - C.G. S.X.
0.26 2e-13 77 Glycine max Gma.1277.1.S1_at BM094440 - - 3e-12 At1g76080 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) C.G. S.X.
0.03 7e-2 38 Hordeum vulgare HW08D08u_x_at HW08D08u - - 2e+0 At2g24060 translation initiation factor 3 (IF-3) family protein C.G. S.X.
0.09 3e-3 44 Populus trichocarpa Ptp.4530.1.A1_at CV271823 hypothetical protein - 3e-14 At1g76080 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) C.G. S.X.
0.47 0 720 Triticum aestivum Ta.2407.1.S1_a_at BE490082 - - 7e-1 At1g76080 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) C.G. S.X.
0.12 1e-2 40 Vitis vinifera 1608019_s_at CA813637 hypothetical protein LOC100259132 - 3e-18 At1g76080 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) C.G. S.X.
0.48 4e-157 553 Zea mays Zm.2137.1.S1_at CO529492 electron transporter/ thiol-disulfide exchange intermediate - 7e-7 At1g76080 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0022900 A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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