CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0470100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 78.0 Os07g0470100 9635.m02790 - - 4e+0 At1g68238 unknown protein S.X. H.G.
0.50 68.0 Os05g0296200 AK064523.1 - Conserved hypothetical protein 1e+0 At5g60980 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein S.X. H.G.
0.44 58.1 Os06g0152500 9634.m00518 - Protein prenyltransferase domain containingprotein 2e-2 At4g16380 metal ion binding S.X. H.G.
0.26 25.6 Os05g0281700 9633.m01850 - - 2e+0 At4g38390 unknown protein S.X. H.G.
0.19 15.1 Os05g0483600 9631.m02049 - - 2e-6 At3g56490 zinc-binding protein, putative / protein kinase C inhibitor, putative S.X. H.G.
0.19 15.1 Os02g0298600 AK064486.1 - Reverse transcriptase (Fragment) 3e+0 At5g36657 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
34.3 99.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.5 99.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.6 99.6 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.5 99.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.2 99.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.3 99.6 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.6 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.0 99.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.4 99.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.3 99.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 6e-7 56 Os08g0373900 9636.m02837 - - 2e+0 At4g20780 calcium-binding protein, putative C.G. S.X.
0.08 3e-15 83 Os02g0499300 AK106994.1 - Conserved hypothetical protein 3e+0 At3g23220 DNA binding / transcription factor C.G. S.X.
0.07 1e-11 71 Os06g0366750 9634.m02592 - - 2e-1 At5g45120 aspartyl protease family protein C.G. S.X.
0.06 1e-11 71 Os10g0181100 AK108427.1 - Conserved hypothetical protein 2e+0 At4g17500 ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1) C.G. S.X.
0.05 6e-7 56 Os01g0332001 9629.m02200 - - 4e+0 At1g13195 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 1e-7 57 Os03g0559300 NM_184669.1 - - 5e-1 At3g18518 RTFL20 (ROTUNDIFOLIA LIKE 20) C.G. S.X.
0.02 4e-2 40 Os12g0612600 9640.m04104 - - 3e-3 At1g22600 - C.G. S.X.
0.01 4e-2 40 Os01g0818100 NM_191091.1 - - 2e-8 At5g01990 auxin efflux carrier family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e+0 32 Arabidopsis thaliana At1g68238 6241144 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.02 2e+0 34 Glycine max PsAffx.C68000082_at PsAffx.C68000082 - - 2e+0 At1g08390 nucleic acid binding C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig24806_at Contig24806 - - 2e-1 At3g22600 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.03 6e+0 32 Populus trichocarpa PtpAffx.217682.1.S1_at pmrna33042 hypothetical protein - 3e-1 At1g73640 AtRABA6a (Arabidopsis Rab GTPase homolog A6a) C.G. S.X.
0.04 3e-1 36 Triticum aestivum Ta.15651.1.A1_at CA486046 - - 2e-2 At5g07600 oleosin / glycine-rich protein C.G. S.X.
0.03 5e+0 30 Vitis vinifera 1620759_at CD801484 - - 6e-1 At5g37474 - C.G. S.X.
0.03 2e+0 32 Zea mays ZmAffx.568.1.A1_at AI714643 - - 1e+1 At5g01734 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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