CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0456000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os07g0456000 9635.m02632 - - 1e+0 At4g27150 2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2 S.X. H.G.
0.80 94.6 Os06g0528000 NM_196265.1 - - 1e+0 At5g52570 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2) S.X. H.G.
0.67 87.2 Os09g0259366 9637.m00619 - - 6e+0 At5g60400 unknown protein S.X. H.G.
0.50 68.0 Os03g0622400 9631.m04085 - Conserved hypothetical protein 4e+0 At5g05370 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative S.X. H.G.
0.46 60.9 Os01g0593100 NM_192598.1 - Hypothetical protein 2e+0 At1g43330 myb family protein-related S.X. H.G.
0.40 51.1 Os06g0275750 NM_185804.1 - - 1e-1 At2g27580 zinc finger (AN1-like) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
112.9 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
61.8 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.4 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.7 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.1 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.8 99.1 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.3 98.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.5 98.7 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.4 98.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.5 98.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 2e-9 65 Os05g0508500 AB053294.1 - Thioredoxin H 2e-6 At5g42980 ATTRX3 (THIOREDOXIN 3) C.G. S.X.
0.05 9e-6 54 Os01g0373500 AK107175.1 - Conserved hypothetical protein 3e-1 At2g48040 - C.G. S.X.
0.03 2e-6 56 Os03g0142300 AK108534.1 - Hypothetical protein 5e-1 At3g06890 unknown protein C.G. S.X.
0.02 1e-7 59 Os01g0143650 NM_184329.1 - - 8e-1 At2g33855 unknown protein C.G. S.X.
0.02 9e-6 54 Os01g0333600 NM_183888.1 - - 1e+0 At1g23980 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e+0 36 Arabidopsis thaliana At4g27150 828823 2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2 F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PO - - - C.G. S.X.
0.02 1e-1 40 Glycine max Gma.9001.1.S1_at AI855616 - - 1e-1 At3g48880 F-box family protein C.G. S.X.
0.03 8e-3 42 Hordeum vulgare Contig716_at Contig716 - - 1e+0 At3g02840 immediate-early fungal elicitor family protein C.G. S.X.
0.01 1e-1 40 Populus trichocarpa Ptp.5317.1.S1_s_at BU832693 hypothetical protein - 2e-15 At5g47390 myb family transcription factor C.G. S.X.
0.04 8e-8 59 Triticum aestivum TaAffx.30201.1.S1_at CA627160 - - 3e+0 At2g35240 plastid developmental protein DAG, putative C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1618786_at CF568965 - - 1e+0 At5g11440 CID5 C.G. S.X.
0.02 2e-6 54 Zea mays Zm.4164.1.A1_x_at BM079246 - - 5e+0 At3g01860 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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