Gene omics information

Query gene ID Os07g0442900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9599.6Os07g0442900AK073296.1-Plant integral membrane protein family protein5e-1At3g06390integral membrane family proteinS.X.H.G.
0.5068.0Os01g0975300AY398581.1-Myb-related protein Atmyb5 (Myb-related protein 5)(MYB transcription factor)5e-3At5g37550unknown proteinS.X.H.G.
0.4051.1Os09g04091009637.m02088-Conserved hypothetical protein2e+0At5g51590DNA-binding protein-relatedS.X.H.G.
0.4051.1Os02g0218800AK105964.1-Allene oxide synthase (EC 4.2.1.92)2e-1At2g35700ERF38 (ERF FAMILY PROTEIN 38)S.X.H.G.
0.3948.3Os09g0361300AK110933.1-Conserved hypothetical protein2e+0At4g35837unknown proteinS.X.H.G.
0.3541.7Os07g0539300AK066237.1-Glycoside hydrolase, family 17 protein2e-2At1g77790glycosyl hydrolase family 17 proteinS.X.H.G.
0.2422.4Os03g0288000AK103162.1-Metallothionein-like protein 1 (MT-1)4e-1At5g02380MT2B (METALLOTHIONEIN 2B)S.X.H.G.
0.2016.5Os04g0452700AK108820.1-Monosaccharide transporter 14e-6At1g34580monosaccharide transporter, putativeS.X.H.G.
0.1510.3Os01g0284500AF032974.1-Nectarin 1 precursor (EC 1.15.1.1) (Superoxidedismutase [Mn])7e-3At1g02335GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.)S.X.H.G.
0.149.3Os06g0692100AK110293.1-Protein kinase domain containing protein1e-1At1g48480RKL1S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.899.0GSM431925Root- +Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
15.298.7GSM431926Root- +Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
13.298.4GSM431928Root- -Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
11.698.2GSM262005IAC165, 4 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.998.1GSM431927Root- -Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
10.598.1GSM262009IAC165, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.298.0GSM262015Nipponbare, 4 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
9.998.0GSM359910IR29 root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
9.197.9GSM359912IR29 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
8.997.8GSM262021Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e-240Os09g0529900AK121655.1-HpcH/HpaI aldolase family protein2e-1At4g10750HpcH/HpaI aldolase family proteinC.G.S.X.
0.016e-240Os09g0530000AK062568.1-Rhodanese-like domain containing protein2e-7At4g27700rhodanese-like domain-containing proteinC.G.S.X.
0.011e+036Os05g03610009633.m02686-Cytochrome P450 family protein3e+0At5g63150unknown proteinC.G.S.X.
0.011e+036Os07g04560009635.m02632--1e+0At4g271502S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-136Arabidopsis thalianaAt3g06390819813integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.037e-136Glycine maxPsAffx.psHB020xB05f_s_atPsAffx.psHB020xB05f--2e+0At2g11005glycine-rich proteinC.G.S.X.
0.251e-58226Hordeum vulgareContig8004_atContig8004--2e-3At3g06390integral membrane family proteinC.G.S.X.
0.033e+034Populus trichocarpaPtpAffx.219131.1.S1_atpmrna34959cytochrome P450-6e-1At5g10970zinc finger (C2H2 type) family proteinC.G.S.X.
0.293e-64246Triticum aestivumTa.25140.1.S1_atCD866293--1e-1At3g06390integral membrane family proteinC.G.S.X.
0.031e-136Vitis vinifera1618236_atCF210257hypothetical protein LOC100260911-4e-3At1g50350-C.G.S.X.
0.234e-21101Zea maysZm.9689.1.A1_atBM335695plant integral membrane protein TIGR01569 containing protein-1e+0At3g43153cAMP-dependent protein kinase inhibitor-relatedC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage