CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0421600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os07g0421600 9635.m02286 - - 7e-1 At4g38740 ROC1 (ROTAMASE CYP 1) S.X. H.G.
0.70 88.4 Os05g0234400 9633.m01264 - - 1e+0 At1g06380 ribosomal protein-related S.X. H.G.
0.61 81.2 Os02g0297100 9630.m01857 - - 3e-2 At2g28160 FRU (FER-LIKE REGULATOR OF IRON UPTAKE) S.X. H.G.
0.60 79.7 Os04g0643500 9632.m05354 - 2OG-Fe(II) oxygenase superfamily protein 2e+0 At5g40860 unknown protein S.X. H.G.
0.58 77.0 Os08g0164732 9636.m00615 - - 4e-1 At4g19200 proline-rich family protein S.X. H.G.
0.56 76.3 Os06g0558501 9634.m03450 - - 2e+0 At1g53285 unknown protein S.X. H.G.
0.53 71.3 Os08g0533200 9636.m04275 - - 4e-1 At1g27450 APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1) S.X. H.G.
0.51 68.7 Os01g0786700 NM_190834.1 - Conserved hypothetical protein 1e+1 At5g47870 unknown protein S.X. H.G.
0.48 63.7 Os01g0319500 9629.m02075 - - 8e-2 At2g30560 glycine-rich protein S.X. H.G.
0.48 63.7 Os07g0480500 NM_187318.1 - - 2e+0 At1g49500 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
38.1 99.8 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
34.2 99.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
34.0 99.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.2 99.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.6 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.3 99.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.9 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.6 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.5 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 5e-31 137 Os10g0195600 AK100207.1 - Transferase family protein 4e+0 At2g42380 bZIP transcription factor family protein C.G. S.X.
0.14 2e-9 65 Os12g0458100 AK065433.1 - Transferase family protein 4e+0 At1g18790 RWP-RK domain-containing protein C.G. S.X.
0.10 2e-9 65 Os03g0659600 9631.m04431 - - 1e+1 At4g35410 clathrin adaptor complex small chain family protein C.G. S.X.
0.09 3e-17 91 Os10g0133500 AK066866.1 - Transferase family protein 4e-3 At4g36780 transcription regulator C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-1 36 Arabidopsis thaliana At4g38740 830029 ROC1 (ROTAMASE CYP 1) Encodes cytosolic cyclophilin ROC1. - - - C.G. S.X.
0.03 6e-2 40 Glycine max GmaAffx.87604.1.S1_at AW596527 - - 9e-1 At5g60360 AALP (Arabidopsis aleurain-like protease) C.G. S.X.
0.03 2e-2 40 Hordeum vulgare Contig16563_at Contig16563 - - 1e+0 At1g30475 - C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.219431.1.S1_at pmrna35352 hypothetical protein - 4e-2 At1g44446 CH1 (CHLORINA 1) C.G. S.X.
0.05 3e-3 44 Triticum aestivum TaAffx.115280.1.S1_at CA659397 - - 8e-3 At3g03480 CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase) C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1617047_at BQ792281 hypothetical protein LOC100267506 - 6e-22 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
0.03 2e-2 40 Zea mays Zm.17215.1.A1_at CO523350 RING zinc finger protein-like - 2e+0 At5g51440 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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