Gene omics information

Query gene ID Os07g0409900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8395.8Os07g0409900AF194414.2-Protein kinase domain containing protein6e-33At2g17890CPK16S.X.H.G.
0.6787.2Os12g0641100AK100537.1-Sodium/hydrogen exchanger family protein8e-2At1g14660ATNHX8S.X.H.G.
0.5777.0Os07g0511000AK070461.1-Conserved hypothetical protein2e-2At5g55060unknown proteinS.X.H.G.
0.4051.1Os03g0283800AK072879.1-RabGAP/TBC domain containing protein2e-15At3g55020RabGAP/TBC domain-containing proteinS.X.H.G.
0.3644.0Os01g0733600AK066744.1-Flavodoxin/nitric oxide synthase domain containingprotein6e-12At3g02280flavodoxin family proteinS.X.H.G.
0.116.5Os03g0363900AK066313.1-Zn-finger, DHHC type domain containing protein2e-4At3g04970zinc finger (DHHC type) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.797.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.196.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.896.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.796.4GSM262020Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
4.696.3GSM262004IAC165, 4 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
4.496.2GSM262019Nipponbare, 11 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
4.396.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
4.296.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.095.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.095.9GSM262012Nipponbare, 2 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.458e-108393Os02g0126400AF194413.1-Protein kinase CPK16e-30At2g17890CPK16C.G.S.X.
0.022e-346Os07g0605200AF091458.1-MADS-box protein EAP2S2e-3At3g57390AGL18C.G.S.X.
0.028e-344Os06g0323000AK111085.1-Hypothetical protein8e-2At4g35760-C.G.S.X.
0.023e-242Os06g01384009634.m00385--3e-2At1g80780CCR4-NOT transcription complex protein, putativeC.G.S.X.
0.018e-344Os05g0551000AK068028.1-Protein of unknown function HHE domain containingprotein4e-16At3g18290EMB2454 (embryo defective 2454)C.G.S.X.
0.013e-242Os11g0600700AK071098.1-Zn-finger, RING domain containing protein1e-8At5g62460zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.286e-33143Arabidopsis thalianaAt2g17890816299CPK16member of Calcium Dependent Protein Kinase---C.G.S.X.
0.069e-550Glycine maxGma.17453.2.S1_atBU964441--6e-11At4g36070CPK18C.G.S.X.
0.337e-102371Hordeum vulgareContig18339_atContig18339--2e-3At5g66210CPK28C.G.S.X.
0.112e-965Populus trichocarpaPtpAffx.146636.1.A1_atCV268823calcium dependent protein kinase 16-9e-15At5g66210CPK28C.G.S.X.
0.301e-68262Triticum aestivumTa.5515.3.S1_atBJ245418calcium-dependent protein kinase-1e-2At4g36070CPK18C.G.S.X.
0.041e-344Vitis vinifera1608587_atCD799705hypothetical protein LOC100248850-9e-21At5g66210CPK28C.G.S.X.
0.043e-240Zea maysZm.41.1.S1_atAI600908calcium dependent protein kinase1-1e-16At2g46700calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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