Gene omics information

Query gene ID Os07g0409801
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9399.2Os07g0409801XM_354377.1--7e-3At5g60850OBP4S.X.H.G.
0.5573.7Os09g02933009637.m00940--2e+0At4g36100-S.X.H.G.
0.5573.7Os07g01177009635.m00171--3e-2At4g05320UBQ10 (POLYUBIQUITIN 10)S.X.H.G.
0.5471.9Os09g02860009637.m00863--7e-2At4g1500060S ribosomal protein L27 (RPL27C)S.X.H.G.
0.5269.6Os04g01580009632.m00633--4e+0At3g03800SYP131 (SYNTAXIN OF PLANTS 131)S.X.H.G.
0.4762.3Os11g05644009639.m03226--9e-1At2g20515unknown proteinS.X.H.G.
0.4660.9Os10g01792009638.m00877--2e+0At4g00830RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.4458.1Os07g06134009635.m04224--4e+0At5g23750remorin family proteinS.X.H.G.
0.4355.4Os06g03620009634.m02540--8e+0At5g40630ubiquitin family proteinS.X.H.G.
0.4253.9Os06g02499009634.m01383--2e+0At2g21030-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
47.299.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
36.699.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.699.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.799.8GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.299.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.099.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in Musa
27.299.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.099.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.799.5GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.799.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-238Os06g0567900AB004799.1-L-ascorbate oxidase precursor (EC 1.10.3.3)(Ascorbase) (ASO)4e-2At5g21100L-ascorbate oxidase, putativeC.G.S.X.
0.025e-238Os08g0367400AK070708.1-Hypothetical protein3e-1At4g14620unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-340Arabidopsis thalianaAt5g60850836206OBP4Encodes a zinc finger protein.---C.G.S.X.
0.071e-136Glycine maxHgAffx.15039.1.S1_atCB299101--1e+1At5g55210unknown proteinC.G.S.X.
0.058e-132Hordeum vulgareContig6729_atContig6729--4e+0At5g43410ethylene-responsive factor, putativeC.G.S.X.
0.049e+030Populus trichocarpaPtpAffx.249.633.A1_x_atCV259819--1e-9At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)C.G.S.X.
0.044e-134Triticum aestivumTaAffx.28835.1.S1_atCA655676--4e+0At5g42635glycine-rich proteinC.G.S.X.
0.067e+028Vitis vinifera1613694_atCB345642--8e+0At4g39880ribosomal protein L23 family proteinC.G.S.X.
0.043e+030Zea maysZm.3856.1.S1_atAW057112--2e+1At5g26262unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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