CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0277200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.32 36.3 Os07g0277200 AK058657.1 - - 1e+0 At1g62040 ATG8C (autophagy 8c) S.X. H.G.
0.44 58.1 Os10g0178500 AK066178.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 3e+0 At4g16750 DRE-binding transcription factor, putative S.X. H.G.
0.33 38.8 Os01g0227800 CB621372 - Cytochrome P450 family protein 4e+0 At5g42635 glycine-rich protein S.X. H.G.
0.03 1.4 Os02g0644600 AK067055.1 - Protein prenyltransferase domain containingprotein 2e+0 At1g43630 unknown protein S.X. H.G.
0.03 1.4 Os01g0849000 AK105208.1 - - 2e-2 At1g28190 unknown protein S.X. H.G.
0.02 1.0 Os06g0367100 AK066930.1 - Glycoside hydrolase, family 13, N-terminal domaincontaining protein 2e-6 At3g20440 alpha-amylase/ catalytic/ cation binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
21.9 99.3 GSM431934 Shoot- +Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
17.1 98.8 GSM387562 Wild-type, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
16.2 98.8 GSM431933 Shoot- +Fe+P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
14.9 98.6 GSM387557 Transgenic line 4, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
14.0 98.5 GSM387561 Transgenic line 22, biological rep. 3 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
13.8 98.5 GSM387559 Transgenic line 22, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
12.4 98.3 GSM149411 Rice Bala 0ppm Arsenate (Control) Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
11.9 98.3 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.4 98.2 GSM387563 Wild-type, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
11.0 98.2 GSM387564 Wild-type, biological rep. 3 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 8e-10 65 Os11g0599600 9639.m03515 - - 1e+1 At5g43540 zinc finger (C2H2 type) family protein C.G. S.X.
0.03 1e-2 42 Os02g0787100 CB668900 - Protein of unknown function DUF676 domaincontaining protein 5e-2 At1g10040 unknown protein C.G. S.X.
0.02 3e-3 44 Os06g0547500 AK107081.1 - Conserved hypothetical protein 6e-2 At5g54460 wound-responsive protein-related C.G. S.X.
0.02 1e-2 42 Os09g0324400 AK108615.1 - Cyclin-like F-box domain containing protein 7e-1 At4g27320 universal stress protein (USP) family protein C.G. S.X.
0.02 4e-2 40 Os11g0633700 BU666935 - - 1e+0 At2g17785 zinc-binding protein-related C.G. S.X.
0.01 1e-2 42 Os05g0498300 AK101127.1 - MutS III domain containing protein 7e-12 At3g20475 MSH5 (MUTS-HOMOLOGUE 5) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At1g62040 842499 ATG8C (autophagy 8c) F:microtubule binding;P:autophagy;C:unknown;MOPFV - - - C.G. S.X.
0.04 1e-1 38 Glycine max PsAffx.psHB020xA12f_s_at PsAffx.psHB020xA12f - - 2e+0 At3g23490 CYN (CYANASE) C.G. S.X.
0.04 5e-5 48 Hordeum vulgare Contig19220_at Contig19220 - - 1e+1 At4g16240 unknown protein C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.153794.1.A1_at CV242349 - - 6e-2 At3g54990 SMZ (SCHLAFMUTZE) C.G. S.X.
0.04 1e-1 38 Triticum aestivum Ta.6415.1.S1_s_at CF133339 - - 1e+0 At1g48960 universal stress protein (USP) family protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1607724_at CF510892 - - 1e+0 At4g01420 CBL5 (CALCINEURIN B-LIKE PROTEIN 5) C.G. S.X.
0.03 6e-1 34 Zea mays ZmAffx.269.1.A1_at AI670397 - - 3e+0 At5g09750 HEC3 (HECATE 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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