Gene omics information

Query gene ID Os07g0257200
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8194.8Os07g0257200AK070788.1-OsNramp1 (Integral membrane protein)1e+0At4g14010RALFL32 (ralf-like 32)S.X.H.G.
0.7391.1Os11g0232100AK105669.1-Protein kinase domain containing protein7e-3At1g72180leucine-rich repeat transmembrane protein kinase, putativeS.X.H.G.
0.7391.1Os05g0114700AK111634.1-Myb, DNA-binding domain containing protein7e-5At4g38620MYB4S.X.H.G.
0.6987.9Os11g0700500AK111626.1-Myb, DNA-binding domain containing protein1e-8At5g59780MYB59 (MYB DOMAIN PROTEIN 59)S.X.H.G.
0.6787.2Os04g01885009632.m00978-Hypothetical protein6e-1At2g18870VEL3 (VERNALIZATION5/VIN3-LIKE)S.X.H.G.
0.5877.0Os01g0297200AK109883.1-AAA ATPase, central region domain containingprotein6e-5At4g25835AAA-type ATPase family proteinS.X.H.G.
0.5877.0Os11g0152700AK102690.1-Transcription factor HBP-1b(C38) (Fragment)3e-1At1g77920bZIP family transcription factorS.X.H.G.
0.5877.0Os08g0563200AK110263.1-Protein of unknown function DUF296 domaincontaining protein2e-1At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)S.X.H.G.
0.5777.0Os12g0567300AK107214.1-Snapdragon myb protein 305 homolog5e-14At3g46130MYB111 (MYB DOMAIN PROTEIN 111)S.X.H.G.
0.5573.7Os02g0809800AK063181.1--5e-1At2g34140Dof-type zinc finger domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.299.2GSM262019Nipponbare, 11 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
21.099.2GSM359907FL478 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
18.198.9GSM262004IAC165, 4 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
16.898.8GSM359905FL478 root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
16.498.8GSM359902FL478 root, control, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
16.298.8GSM262009IAC165, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
15.698.7GSM359904FL478 root, control, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
15.598.7GSM262006IAC165, 11 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
14.698.6GSM262014Nipponbare, 4 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
13.798.5GSM262018Nipponbare, 11 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.451e-44182Os07g0258400AK103557.1-Metal transporter Nramp6 (AtNramp6)2e-8At1g80830NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1)C.G.S.X.
0.054e-861Os02g0131800AK102180.1-Root-specific metal transporter2e-1At5g09820plastid-lipid associated protein PAP / fibrillin family proteinC.G.S.X.
0.022e-346Os07g06702009635.m04777-C2 domain containing protein1e+0At5g10140FLC (FLOWERING LOCUS C)C.G.S.X.
0.028e-344Os03g08448509631.m06204--2e+0At5g66700HB53C.G.S.X.
0.028e-344Os05g03689009633.m02780--1e+0At1g34000OHP2 (ONE-HELIX PROTEIN 2)C.G.S.X.
0.028e-344Os09g05597009637.m03292--1e-1At3g29300unknown proteinC.G.S.X.
0.018e-344Os01g0941800AK107393.1-Phosphoesterase At2g46880 family protein3e-6At3g10150PAP16 (PURPLE ACID PHOSPHATASE 16)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+036Arabidopsis thalianaAt4g14010827037RALFL32 (ralf-like 32)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.---C.G.S.X.
0.034e-138Glycine maxGma.6552.1.S1_atBQ627716--6e+0At5g23420HMGB6C.G.S.X.
0.343e-113408Hordeum vulgareContig17497_atContig17497--2e+0At1g76190auxin-responsive family proteinC.G.S.X.
0.173e-1791Populus trichocarpaPtpAffx.205550.1.S1_atpmrna10977nramp transporter-6e-5At1g15960NRAMP6C.G.S.X.
0.543e-112406Triticum aestivumTa.4824.1.S1_atCD885392--2e-2At4g18790NRAMP5C.G.S.X.
0.021e+034Vitis vinifera1614706_s_atCF605994--4e-3At5g43410ethylene-responsive factor, putativeC.G.S.X.
0.041e-138Zea maysZm.13647.1.S1_atAY107242.1metal transporter Nramp3-3e-12At5g67330ATNRAMP4C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006810The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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