CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0248900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.88 96.8 Os07g0248900 AK066571.1 - Hypothetical protein 2e+0 At4g29470 phospholipase A2, putative S.X. H.G.
0.50 68.0 Os05g0464100 AK073132.1 - Conserved hypothetical protein 2e+0 At5g43250 NF-YC13 (NUCLEAR FACTOR Y, SUBUNIT C13) S.X. H.G.
0.48 63.7 Os12g0211000 AK101792.1 - Hypothetical protein 3e+0 At5g57290 60S acidic ribosomal protein P3 (RPP3B) S.X. H.G.
0.44 58.1 Os01g0571400 9629.m03712 - - 2e-1 At4g27310 zinc finger (B-box type) family protein S.X. H.G.
0.42 53.9 Os12g0290800 AK062678.1 - Hypothetical protein 1e+0 At2g26810 unknown protein S.X. H.G.
0.42 53.9 Os12g0425200 9640.m02256 - - 5e+0 At5g04440 unknown protein S.X. H.G.
0.40 51.1 Os10g0318300 9638.m01394 - Conserved hypothetical protein 6e-1 At5g42330 unknown protein S.X. H.G.
0.35 41.7 Os04g0201900 9632.m01129 - Curculin-like (mannose-binding) lectin domaincontaining protein 1e-1 At4g02630 protein kinase family protein S.X. H.G.
0.33 38.8 Os05g0469900 AK109700.1 - Conserved hypothetical protein 9e-1 At1g62640 KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III) S.X. H.G.
0.29 31.1 Os09g0528300 AK121125.1 - Conserved hypothetical protein 1e-1 At1g26665 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
61.6 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
37.3 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
32.0 99.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.3 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.3 99.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.6 99.4 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.3 99.4 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.6 99.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.4 99.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.8 99.0 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 3e-37 159 Os01g0965300 AK111057.1 - Hypothetical protein 5e+0 At5g28800 unknown protein C.G. S.X.
0.12 3e-59 232 Os03g0562400 AK063408.1 - Hypothetical protein 9e-1 At2g27840 HDT4 C.G. S.X.
0.08 1e-24 117 Os11g0115600 AK063510.1 - Conserved hypothetical protein 1e+0 At2g44220 unknown protein C.G. S.X.
0.06 7e-63 244 Os06g0360600 AK119263.1 - Hypothetical protein 2e+0 At1g06900 catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding C.G. S.X.
0.03 4e-15 85 Os03g0271900 AK103225.1 - - 1e+0 At2g39710 aspartyl protease family protein C.G. S.X.
0.01 3e-7 57 Os04g0111900 AK121138.1 - Vrga1 6e-2 At2g14288 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-1 36 Arabidopsis thaliana At4g29470 829068 phospholipase A2, putative F:phospholipase A2 activity;P:phospholipid metabolic process, lipid catabolic process;C:endomembrane system;MPBO - - - C.G. S.X.
0.03 1e-2 42 Glycine max Gma.2843.1.S1_at CD398273 - - 2e+1 At5g44894 unknown protein C.G. S.X.
0.02 7e-2 38 Hordeum vulgare Contig5331_at Contig5331 - - 5e-1 At5g57000 unknown protein C.G. S.X.
0.04 2e-1 38 Populus trichocarpa Ptp.4301.1.S1_s_at CV280558 - - 6e-4 At2g22080 unknown protein C.G. S.X.
0.03 1e-1 38 Triticum aestivum Ta.5627.3.S1_x_at CA696907 - - 3e-1 At5g57000 unknown protein C.G. S.X.
0.03 2e-1 36 Vitis vinifera 1609017_s_at CA809548 hypothetical protein LOC100262493 - 1e-6 At3g14430 unknown protein C.G. S.X.
0.02 9e-1 34 Zea mays Zm.6246.2.A1_at AI677558 - - 9e-7 At2g22080 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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