CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0222900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os07g0222900 CB645570 - KDPG and KHG aldolase family protein 3e+0 At3g52720 ACA1 (ALPHA CARBONIC ANHYDRASE 1) S.X. H.G.
0.59 78.0 Os07g0510100 AK066776.1 - Methionine aminopeptidase-like protein 3e-19 At1g13270 MAP1C (METHIONINE AMINOPEPTIDASE 1B) S.X. H.G.
0.53 71.3 Os11g0544000 AK066017.1 - - 7e-2 At1g19990 unknown protein S.X. H.G.
0.50 68.0 Os01g0306800 AK099426.1 - Conserved hypothetical protein 9e-1 At5g42370 unknown protein S.X. H.G.
0.50 68.0 Os01g0829000 AK065327.1 - Conserved hypothetical protein 7e-1 At5g43410 ethylene-responsive factor, putative S.X. H.G.
0.27 27.5 Os03g0736400 AK105812.1 - Conserved hypothetical protein 95 family protein 1e-24 At3g28460 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
41.5 99.9 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
40.2 99.9 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
37.7 99.8 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
34.9 99.8 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
34.9 99.8 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
32.9 99.8 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
12.3 98.3 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.0 98.0 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
8.6 97.8 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
5.5 96.8 GSM267999 Green leaves in F9G RILs from parents lines GSE10872 Molecular characterization and genetic analysis reveal SA0420 as an early senescing rice mutant with pleotropic
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-3 44 Os05g0541800 AK071854.1 - Ipomoelin 2e-1 At2g45480 AtGRF9 (GROWTH-REGULATING FACTOR 9) C.G. S.X.
0.02 2e-2 42 Os01g0822800 AK065060.1 - Zn-finger, RING domain containing protein 2e-1 At5g01880 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 2e-2 42 Os06g0148500 AK109249.1 - Cyclin-like F-box domain containing protein 2e+0 At5g46850 - C.G. S.X.
0.02 2e-2 42 Os08g0238200 AK067264.1 - Endo-1,3;1,4-beta-D-glucanase precursor (EC3.2.1.-) 2e+0 At3g23570 dienelactone hydrolase family protein C.G. S.X.
0.02 9e-2 40 Os11g0117600 9639.m00160 - WRKY transcription factor 50 (Fragment) 1e-4 At1g80840 WRKY40 C.G. S.X.
0.01 6e-3 44 Os10g0521600 AK065223.1 - The start codon is not identified. 2e-2 At5g07270 ankyrin repeat family protein C.G. S.X.
0.01 2e-2 42 Os11g0507400 AK120224.1 - Conserved hypothetical protein 3e-10 At3g26950 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At3g52720 824438 ACA1 (ALPHA CARBONIC ANHYDRASE 1) F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:endomembrane system;MBPOF - - - C.G. S.X.
0.02 4e+0 34 Glycine max PsAffx.psZS010xD06f_at PsAffx.psZS010xD06f - - 3e+0 At4g09270 unknown protein C.G. S.X.
0.02 3e-1 36 Hordeum vulgare Contig3986_s_at Contig3986 - - 6e-2 At4g13450 universal stress protein (USP) family protein C.G. S.X.
0.02 2e-1 38 Populus trichocarpa PtpAffx.105366.1.S1_s_at CK106120 hypothetical protein - 5e-12 At4g15850 ATRH1 C.G. S.X.
0.02 7e-1 36 Triticum aestivum TaAffx.5748.1.S1_at CA699812 - - 4e+0 At1g10030 ERG28 (Arabidopsis homolog of yeast ergosterol28) C.G. S.X.
0.02 8e-1 34 Vitis vinifera 1607149_at CB982262 hypothetical protein LOC100254127 - 4e-114 At2g30970 ASP1 (ASPARTATE AMINOTRANSFERASE 1) C.G. S.X.
0.02 5e+0 32 Zea mays Zm.5669.1.A1_at AI629879 peroxisomal membrane carrier protein - 1e-2 At2g39970 peroxisomal membrane protein (PMP36) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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