CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0222200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os07g0222200 AK107502.1 - Protein of unknown function DUF594 family protein 4e-4 At2g39830 DAR2 (DA1-RELATED PROTEIN 2) S.X. H.G.
0.67 87.2 Os02g0639500 9630.m04087 - Major pollen allergen Lol pI family protein 2e-3 At2g20750 ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1) S.X. H.G.
0.60 79.7 Os01g0954900 AK110957.1 - Peptidase A1, pepsin family protein 3e-3 At5g07030 aspartic-type endopeptidase S.X. H.G.
0.60 79.7 Os02g0666600 AK107463.1 - Harpin-induced 1 domain containing protein 6e+0 At5g26622 beta-galactosidase S.X. H.G.
0.60 79.7 Os05g0304900 AK105545.1 - Glycoside hydrolase, family 10 protein 1e-12 At4g38300 glycosyl hydrolase family 10 protein S.X. H.G.
0.57 77.0 Os01g0210300 AK106937.1 - - 2e+0 At1g13650 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
116.5 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
26.3 99.5 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.1 98.4 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.1 98.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.0 98.0 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.8 98.0 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.7 98.0 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.7 98.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2 97.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2 97.9 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 1e-17 93 Os10g0482200 9638.m02996 - - 5e-3 At1g78110 unknown protein C.G. S.X.
0.04 3e-6 56 Os06g0120200 AK066196.1 - Protein of unknown function DUF594 family protein 3e-1 At1g74560 NRP1 (NAP1-RELATED PROTEIN 1) C.G. S.X.
0.03 2e-7 59 Os06g0119100 AK065857.1 - Protein of unknown function DUF594 family protein 3e-1 At4g12050 DNA-binding protein-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e-4 48 Arabidopsis thaliana At2g39830 818570 DAR2 (DA1-RELATED PROTEIN 2) F:zinc ion binding;P:unknown;C:chloroplast;MOPFB - - - C.G. S.X.
0.01 8e-3 44 Glycine max PsAffx.C3000031_at PsAffx.C3000031 - - 4e-1 At1g11700 unknown protein C.G. S.X.
0.02 4e-2 40 Hordeum vulgare Contig25984_at Contig25984 - - 9e-1 At4g24380 unknown protein C.G. S.X.
0.02 3e-2 42 Populus trichocarpa PtpAffx.211928.1.S1_at pmrna23424 hypothetical protein - 2e+0 At2g33793 unknown protein C.G. S.X.
0.02 2e-2 42 Triticum aestivum TaAffx.78140.1.S1_at CA737007 - - 2e+0 At2g26020 PDF1.2b (plant defensin 1.2b) C.G. S.X.
0.02 6e-3 42 Vitis vinifera 1615188_at CB974599 - - 9e-1 At3g02310 SEP2 (SEPALLATA 2) C.G. S.X.
0.01 4e-2 40 Zea mays Zm.6045.1.A1_a_at X73980.1 alpha tubulin4 - 0 At1g50010 TUA2 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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