CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0206900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.88 96.8 Os07g0206900 AK107761.1 - Conserved hypothetical protein 1e+0 At4g18900 transducin family protein / WD-40 repeat family protein S.X. H.G.
0.57 77.0 Os07g0105900 AK059175.1 - NB-ARC domain containing protein 1e-2 At2g22430 ATHB6 S.X. H.G.
0.55 73.7 Os08g0550500 AK058423.1 - Conserved hypothetical protein 4e+0 At5g41440 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.55 73.7 Os02g0161800 AK105544.1 - Peroxidase precursor (EC 1.11.1.7) 7e-1 At1g48750 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein S.X. H.G.
0.53 71.3 Os12g0274200 AK063071.1 - Lipolytic enzyme, G-D-S-L family protein 8e-6 At1g71691 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.47 62.3 Os08g0546900 AU197913 - NC domain containing protein 4e+0 At5g59490 haloacid dehalogenase-like hydrolase family protein S.X. H.G.
0.36 44.0 Os01g0631500 AK063308.1 - Beta-1,3-glucanase-like protein 7e-4 At4g26830 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds S.X. H.G.
0.32 36.3 Os02g0831500 AK061268.1 - Sucrose synthase (EC 2.4.1.13) (Sucrose-UDPglucosyltransferase) (Fragment) 3e+0 At5g20830 SUS1 (SUCROSE SYNTHASE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.5 99.1 GSM67059 IR29 control replicate 2 GSE3053 Rice salt expression
18.4 99.0 GSM99881 TCHW P23_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
17.8 98.9 GSM99867 TCHW P10_ir29 salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
14.4 98.6 GSM99882 TCHW P24_ir29 salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
13.4 98.5 GSM99869 TCHW P12_ir29 salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
12.2 98.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.5 97.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.9 97.8 GSM67058 IR29 control replicate 1 GSE3053 Rice salt expression
8.9 97.8 GSM99868 TCHW P11_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
8.4 97.7 GSM159199 Inflorescence (P4, 10 - 15 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-4 46 Os02g0205200 AK106819.1 - Protein of unknown function DUF642 family protein 5e-2 At2g15930 unknown protein C.G. S.X.
0.03 2e-3 44 Os06g0626600 AK109408.2 - Sulfotransferase family protein 4e-2 At1g74090 SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18) C.G. S.X.
0.02 3e-2 40 Os03g0268600 AK069274.1 - Protein phosphatase type 2C 2e-1 At5g59220 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.02 1e-1 38 Os05g0489200 AK069135.1 - Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein 2e+0 At2g27300 NTL8 (NTM1-LIKE 8) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 34 Arabidopsis thaliana At4g18900 827624 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:biological_process unknown;C:cellular_component unknown;MFOBPAV - - - C.G. S.X.
0.03 2e+0 34 Glycine max Gma.7051.1.A1_at BU544101 - - 4e+0 At5g53045 - C.G. S.X.
0.18 4e-11 67 Hordeum vulgare Contig9621_s_at Contig9621 - - 1e+0 At2g44581 protein binding / zinc ion binding C.G. S.X.
0.04 6e+0 32 Populus trichocarpa PtpAffx.90695.1.A1_at CK096557 hypothetical protein - 6e-1 At1g75170 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein C.G. S.X.
0.18 2e-8 59 Triticum aestivum Ta.20540.3.S1_x_at BJ318550 - - 1e+0 At2g44581 protein binding / zinc ion binding C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1616838_at BQ797792 - - 3e-1 At1g12180 - C.G. S.X.
0.10 1e-10 65 Zea mays Zm.6416.1.S1_at BQ744568 hypothetical protein LOC100277106 - 3e+0 At5g22880 HTB2 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006508 The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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