CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0166700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os07g0166700 AY332473.1 - Protein kinase domain containing protein 4e-1 At1g09483 unknown protein S.X. H.G.
0.67 87.2 Os09g0450600 9637.m02442 - TB2/DP1 and HVA22 related protein family protein 4e+0 At3g57870 SCE1 (SUMO CONJUGATION ENZYME 1) S.X. H.G.
0.42 53.9 Os03g0135200 AK059226.1 - Glutathione S-transferase GST 9 (EC 2.5.1.18) 2e+0 At4g10090 unknown protein S.X. H.G.
0.40 51.1 Os04g0447600 AK061282.1 - NADPH-dependent codeinone reductase (EC 1.1.1.247) 2e-1 At1g56530 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.29 31.1 Os07g0159700 9635.m00597 - Protein kinase domain containing protein 3e-2 At3g17420 GPK1 S.X. H.G.
0.29 31.1 Os05g0363500 CA757967 - ARM repeat fold domain containing protein 2e+0 At3g23245 unknown protein S.X. H.G.
0.27 27.5 Os02g0256100 AK059595.1 - Glycoside hydrolase, family 28 protein 1e-24 At4g23820 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
22.7 99.3 GSM99860 TCHW P3_m103 control, biological rep3 GSE4438 Expression data from rice under salinity stress
21.1 99.2 GSM99858 TCHW P1_m103 control, biological rep1 GSE4438 Expression data from rice under salinity stress
15.1 98.6 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
13.9 98.5 GSM99868 TCHW P11_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
13.2 98.4 GSM67052 FL478 control replicate 1 GSE3053 Rice salt expression
12.7 98.4 GSM67060 IR29 salt stressed replicate 1 GSE3053 Rice salt expression
12.2 98.3 GSM99859 TCHW P2_m103 control, biological rep2 GSE4438 Expression data from rice under salinity stress
11.9 98.3 GSM99864 TCHW P7_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
11.7 98.2 GSM99869 TCHW P12_ir29 salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
11.7 98.2 GSM67062 IR29 salt stressed replicate 3 GSE3053 Rice salt expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.42 1e-64 250 Os03g0791700 AK103914.1 - Protein kinase domain containing protein 1e-1 At3g12360 ITN1 (INCREASED TOLERANCE TO NACL) C.G. S.X.
0.08 5e-150 533 Os07g0166800 AK121382.1 - Rad6 (Ubiquitin carrier protein) 1e-29 At2g02760 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) C.G. S.X.
0.01 5e-5 52 Os07g0596900 AY341847.1 - WRKY transcription factor 30 9e-10 At2g03340 WRKY3 C.G. S.X.
0.01 3e-3 46 Os01g0935000 AK070390.1 - Zn-finger, C2H2 type domain containing protein 4e-6 At5g03150 JKD (JACKDAW) C.G. S.X.
0.01 3e-3 46 Os02g0579300 9630.m03526 - Myb, DNA-binding domain containing protein 3e-24 At3g01140 MYB106 (myb domain protein 106) C.G. S.X.
0.01 3e-3 46 Os05g0126050 9633.m00277 - - 1e-2 At5g47090 unknown protein C.G. S.X.
0.01 5e-2 42 Os09g0420000 9637.m02174 - Zn-finger, cysteine-rich C6HC domain containingprotein 5e-1 At1g51510 Y14 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e-1 38 Arabidopsis thaliana At1g09483 837472 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.01 5e-1 38 Glycine max PsAffx.C13000088_at PsAffx.C13000088 - - 9e-1 At4g06534 unknown protein C.G. S.X.
0.21 8e-90 331 Hordeum vulgare Contig13338_at Contig13338 - - 5e-1 At4g33140 unknown protein C.G. S.X.
0.02 2e+0 36 Populus trichocarpa PtpAffx.211092.1.S1_at pmrna21790 hypothetical protein - 3e-20 At3g03770 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.27 2e-49 198 Triticum aestivum Ta.10230.1.S1_at BJ251758 - - 4e+0 At4g14580 CIPK4 (CBL-interacting protein kinase 4) C.G. S.X.
0.01 2e+0 34 Vitis vinifera 1608286_at CD797963 hypothetical protein LOC100253910 - 1e+0 At2g32050 cell cycle control protein-related C.G. S.X.
0.25 3e-46 186 Zea mays Zm.2545.1.A1_at CO520109 hypothetical protein LOC100191420 - 3e+0 At5g05710 pleckstrin homology (PH) domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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