CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os07g0153300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.76 92.2 Os07g0153300 AK066146.1 - Protein of unknown function DUF1365 family protein 4e-4 At1g30130 unknown protein S.X. H.G.
0.49 64.4 Os09g0270900 AK106363.1 - Fe-S metabolism associated SufE family protein 8e-1 At4g31300 PBA1 S.X. H.G.
0.43 55.4 Os06g0104000 AK068490.1 - Conserved hypothetical protein 5e-3 At2g46915 unknown protein S.X. H.G.
0.43 55.4 Os06g0232200 CB682267 - Carbohydrate kinase, PfkB family protein 3e-11 At1g66430 pfkB-type carbohydrate kinase family protein S.X. H.G.
0.38 46.9 Os04g0528100 AK065957.1 - Conserved hypothetical protein 2e+0 At2g10970 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.38 46.9 Os02g0118000 AK068524.1 - TPR-like domain containing protein 2e-1 At2g11910 unknown protein S.X. H.G.
0.38 46.9 Os02g0668100 AK106165.1 - Polyprenyl synthetase family protein 2e-1 At4g18620 - S.X. H.G.
0.36 44.0 Os05g0294600 AK068789.1 - Protein prenyltransferase domain containingprotein 3e-4 At5g50280 EMB1006 (embryo defective 1006) S.X. H.G.
0.35 41.7 Os08g0308800 9636.m02120 - Hypothetical protein 6e-15 At3g46630 - S.X. H.G.
0.32 36.3 Os12g0276100 AK062912.1 - Hypothetical protein 2e+0 At3g17830 DNAJ heat shock family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.9 98.5 GSM357136 14-day-old seedling, heat shock, rep 2 GSE14275 Expression data for heat shock in rice seedlings
11.3 98.2 GSM357135 14-day-old seedling, heat shock, rep 1 GSE14275 Expression data for heat shock in rice seedlings
11.1 98.2 GSM357137 14-day-old seedling, heat shock, rep 3 GSE14275 Expression data for heat shock in rice seedlings
8.4 97.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
5.6 96.9 GSM421674 XOC, 4 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
3.9 95.8 GSM421714 MOCK, 4 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
3.9 95.8 GSM302923 seedling_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
3.9 95.8 GSM421694 XOO, 4 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
3.8 95.7 GSM281585 Rice Zhonghua11, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
3.7 95.6 GSM421710 MOCK, 2 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e-2 44 Os03g0374100 AK066002.1 - Hepatocellular carcinoma-associated antigen 59family protein 8e-4 At1g02330 - C.G. S.X.
0.01 2e-1 40 Os07g0672500 AK119940.1 - AAA ATPase, central region domain containingprotein 7e+0 At5g51010 rubredoxin family protein C.G. S.X.
0.01 2e-1 40 Os11g0171300 CB662296 - Fructose-bisphosphate aldolase, chloroplastprecursor (EC 4.1.2.13) (ALDP) 5e-33 At4g38970 fructose-bisphosphate aldolase, putative C.G. S.X.
0.01 7e-1 38 Os05g0389400 AK100484.1 - Biopterin transport-related protein BT1 familyprotein 2e-2 At1g47240 NRAMP2 C.G. S.X.
0.01 7e-1 38 Os06g0611100 AK109238.1 - - 6e+0 At5g55570 unknown protein C.G. S.X.
0.01 3e+0 36 Os04g0151300 9632.m00563 - - 3e-1 At1g78620 integral membrane family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-4 48 Arabidopsis thaliana At1g30130 839892 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBPF - - - C.G. S.X.
0.01 2e+0 36 Glycine max GmaAffx.86022.1.S1_at AW595945 - - 4e+0 At5g65650 unknown protein C.G. S.X.
0.01 7e-1 36 Hordeum vulgare rbasd17i02_s_at rbasd17i02 - - 9e-35 At2g21330 fructose-bisphosphate aldolase, putative C.G. S.X.
0.04 1e-4 50 Populus trichocarpa PtpAffx.93878.1.S1_at CX658512 hypothetical protein - 1e-10 At1g30130 unknown protein C.G. S.X.
0.05 4e-4 48 Triticum aestivum TaAffx.111888.1.S1_at CA631118 - - 1e+0 At4g09800 RPS18C (S18 RIBOSOMAL PROTEIN) C.G. S.X.
0.01 1e-1 38 Vitis vinifera 1617395_at CF514645 - - 1e+0 At4g17615 CBL1 (CALCINEURIN B-LIKE PROTEIN 1) C.G. S.X.
0.01 6e-1 36 Zea mays Zm.6855.1.A1_at CK369715 hypothetical protein LOC100193041 - 7e+0 At2g14378 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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